Sequence 1: | XP_011532283.1 | Gene: | ROBO2 / 6092 | HGNCID: | 10250 | Length: | 1597 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
Alignment Length: | 1495 | Identity: | 451/1495 - (30%) |
---|---|---|---|
Similarity: | 668/1495 - (44%) | Gaps: | 270/1495 - (18%) |
- Green bases have known domain annotations that are detailed below.
Human 13 LELLFVLMLFLSGPTLSKLTRTPWKGKPWKGGSRLRQEDFPPRIVEHPSDVIVSKGEPTTLNCKA 77
Human 78 EGRPTPTIEWYKDGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEA 142
Human 143 VSRNASLEVALLRDDFRQNPTDVVVAAGEPAILECQPPRGHPEPTIYWKKDKVRID---DKEERI 204
Human 205 SIRGGKLMISNTRKSDAGMYTCVGTNMVGERDSDPAELTVFERPTFLRRPINQVVLEEEAVEFRC 269
Human 270 QVQGDPQPTVRWKK--DDADLPRGRYDIKDDYTLRIKKTMSTDEGTYMCIAENRVGKMEASATLT 332
Human 333 VRARPVAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRCSV 397
Human 398 SPTGD----LTITNIQRSDAGYYI-CQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLA 457
Human 458 VDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNL-RISDTGTYTCVATSSS 521
Human 522 GETSWSAVLDV---TESGATISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASA-- 581
Human 582 -YIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDI 645
Human 646 SPPAQGVDHRQV-QKELGDV--LVRLHNPVVL------TPTTVQVTWTVDRQPQFIQGYRVMYRQ 701
Human 702 TSG-----LQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE 761
Human 762 APSAPPQSVTVLTVGSYNSTSISVSWDPPPPDH-QNGIIQEYKIWCLG----NETRFHINKTVDA 821
Human 822 AIRSVIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGRRNEVVIT-ENNNSITEQIT-DVVK 884
Human 885 QPAFIAGIGG--ACWVILMGFSIWLYWRRKKRKGLS------NYAVTFQRGDGGLMSNGSRPGLL 941
Human 942 NAGDPSYPWLADSWPATSLPVNNSNSGPNEIGNFGRGDVLPPVPGQGDKTATMLSDGAIYSSIDF 1006
Human 1007 TTKTSYNSSSQITQATPYATTQILHSNSIHELAVDLPDPQWKSSIQQKTDLMGFGYSLPDQNKGN 1071
Human 1072 NALLYIPDYRLAEGLSNRMPHNQSQDFSTTSSHNSSERSGS--LSGGKGG--------------- 1119
Human 1120 ------KKKKNKNSSKPQKNNGSTWANVPLPPPPVQPLPGTELEHYAVEQQENGYDSDSWCPPLP 1178
Human 1179 VQTYLHQGLEDELEEDDDRVPTPPVRGVASSPAISFGQQSTATLTPSPREEMQ-PMLQAHLDEL- 1241
Human 1242 ---TRAYQFDIAKQTWHIQSNNQPPQPPVPPLG-YVSGALISDLETDVADDDADDEEEALEIPRP 1302
Human 1303 LRALDQTPGSSMDNLDSSVTGSMVNG-----WGSASDEDRNF-------SSHRSSVGSSSDGSIF 1355
Human 1356 ASGSF--------AQALVAAADKAGFRLDGTSLTRTGKAFTSSQRPRPTSPFSTDS--NTSAALS 1410
Human 1411 1410 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ROBO2 | XP_011532283.1 | Ig1_Robo | 53..152 | CDD:143317 | 59/98 (60%) |
Ig | 160..244 | CDD:325142 | 37/86 (43%) | ||
Ig | 265..333 | CDD:325142 | 27/69 (39%) | ||
Ig4_Robo | 355..444 | CDD:143203 | 32/93 (34%) | ||
IG | 451..532 | CDD:214652 | 35/81 (43%) | ||
FN3 | 549..642 | CDD:238020 | 30/95 (32%) | ||
FN3 | 673..758 | CDD:238020 | 21/95 (22%) | ||
FN3 | 766..859 | CDD:238020 | 34/97 (35%) | ||
PTN13_u3 | <1374..>1431 | CDD:318742 | 11/39 (28%) | ||
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 59/98 (60%) |
I-set | 23..116 | CDD:254352 | 58/96 (60%) | ||
I-set | 122..211 | CDD:254352 | 39/89 (44%) | ||
Ig | 125..211 | CDD:299845 | 37/86 (43%) | ||
I-set | 215..302 | CDD:254352 | 34/86 (40%) | ||
Ig | 232..302 | CDD:299845 | 27/69 (39%) | ||
I-set | 306..401 | CDD:254352 | 32/96 (33%) | ||
Ig | 320..411 | CDD:299845 | 32/93 (34%) | ||
I-set | 412..492 | CDD:254352 | 36/80 (45%) | ||
IGc2 | 429..489 | CDD:197706 | 26/60 (43%) | ||
FN3 | 519..612 | CDD:238020 | 30/94 (32%) | ||
FN3 | 644..735 | CDD:238020 | 22/98 (22%) | ||
fn3 | 743..832 | CDD:278470 | 32/91 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 104 | 1.000 | Domainoid score | I6690 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4222 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0.917438 | Normalized mean entropy | S5483 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8568 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101537 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.620 |