| Sequence 1: | XP_011532278.1 | Gene: | ROBO1 / 6091 | HGNCID: | 10249 | Length: | 1654 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_063126810.1 | Gene: | Robo1 / 58946 | RGDID: | 61941 | Length: | 1662 | Species: | Rattus norvegicus |
| Alignment Length: | 1663 | Identity: | 1548/1663 - (93%) |
|---|---|---|---|
| Similarity: | 1588/1663 - (95%) | Gaps: | 33/1663 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Human 9 LVMISLLSL----SP-----------------NHLFLAQLIPDPEDVERGNDHGTPIPTSDNDDN 52
Human 53 SLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRS 117
Human 118 HRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVA 182
Human 183 VGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVG 247
Human 248 ERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDD 312
Human 313 HTLKIRKVTAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEA 377
Human 378 TGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIIT 442
Human 443 KAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQ 507
Human 508 LENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEV 572
Human 573 TDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETSAIKGLKPNAIYLFLV 637
Human 638 RAANAYGISDPSQISDPVKTQDVLPTSQGVDHKQVQRELGNAVLHLHNPTVLSSSSIEVHWTVDQ 702
Human 703 QSQYIQGYKILYRPSGANHGESDWLVFEVRTPAKNSVVIPDLRKGVNYEIKARPFFNEFQGADSE 767
Human 768 IKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKT 832
Human 833 VDGSTFSVVIPFLVPGIRYSVEVAASTGAGSGVKSEPQFIQLDAHGNPVSPEDQVSLAQQISDVV 897
Human 898 KQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSG 962
Human 963 GRPGLLNISEPAAQPWLADTWPNTGNNHNDCSISCCTAGNGNSDSNLTTYSRPADCIANYNNQLD 1027
Human 1028 NKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNN 1092
Human 1093 GSGDSGEKHWKPLGQQKQEVAPVQYNIVEQNKLNKDYRANDTVPPTIPYNQSYDQNTGGSYNSSD 1157
Human 1158 RGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVP 1222
Human 1223 PARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEETGH 1287
Human 1288 MQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLR 1352
Human 1353 GLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYA 1417
Human 1418 GLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKLKHQPGHLRRETYTDD 1482
Human 1483 LPPPPVPPPAIKSPTAQSKTQLEVRPVVVPKLPSMDARTDRSSDRKGSSYKGREVLDGRQVVDMR 1547
Human 1548 TNPGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSS 1612
Human 1613 RGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELE 1650 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| ROBO1 | XP_011532278.1 | IgC_1_Robo | 68..166 | CDD:409490 | 96/97 (99%) |
| Ig strand A | 68..72 | CDD:409490 | 3/3 (100%) | ||
| Ig strand A' | 75..80 | CDD:409490 | 4/4 (100%) | ||
| Ig strand B | 84..92 | CDD:409490 | 7/7 (100%) | ||
| Ig strand C | 98..103 | CDD:409490 | 4/4 (100%) | ||
| Ig strand C' | 106..108 | CDD:409490 | 1/1 (100%) | ||
| Ig strand D | 119..122 | CDD:409490 | 2/2 (100%) | ||
| Ig strand E | 125..131 | CDD:409490 | 5/5 (100%) | ||
| Ig strand F | 143..151 | CDD:409490 | 6/7 (86%) | ||
| Ig strand G | 154..166 | CDD:409490 | 11/11 (100%) | ||
| IgI_2_Robo | 173..258 | CDD:409389 | 84/84 (100%) | ||
| Ig strand A | 173..176 | CDD:409389 | 2/2 (100%) | ||
| Ig strand A' | 178..182 | CDD:409389 | 3/3 (100%) | ||
| Ig strand B | 186..193 | CDD:409389 | 6/6 (100%) | ||
| Ig strand C | 201..206 | CDD:409389 | 4/4 (100%) | ||
| Ig strand C' | 208..211 | CDD:409389 | 2/2 (100%) | ||
| Ig strand D | 217..221 | CDD:409389 | 3/3 (100%) | ||
| Ig strand E | 223..229 | CDD:409389 | 5/5 (100%) | ||
| Ig strand F | 236..244 | CDD:409389 | 7/7 (100%) | ||
| Ig strand G | 247..258 | CDD:409389 | 10/10 (100%) | ||
| IgI_3_Robo | 265..347 | CDD:409390 | 81/81 (100%) | ||
| Ig strand A | 265..268 | CDD:409390 | 2/2 (100%) | ||
| Ig strand A' | 270..274 | CDD:409390 | 3/3 (100%) | ||
| Ig strand B | 277..286 | CDD:409390 | 8/8 (100%) | ||
| Ig strand C | 292..297 | CDD:409390 | 4/4 (100%) | ||
| Ig strand C' | 300..303 | CDD:409390 | 2/2 (100%) | ||
| Ig strand D | 306..311 | CDD:409390 | 4/4 (100%) | ||
| Ig strand E | 312..319 | CDD:409390 | 6/6 (100%) | ||
| Ig strand F | 326..334 | CDD:409390 | 7/7 (100%) | ||
| Ig strand G | 337..347 | CDD:409390 | 9/9 (100%) | ||
| IgI_4_Robo | 355..452 | CDD:409391 | 95/96 (99%) | ||
| Ig strand A | 355..359 | CDD:409391 | 3/3 (100%) | ||
| Ig strand A' | 361..365 | CDD:409391 | 3/3 (100%) | ||
| Ig strand B | 371..379 | CDD:409391 | 7/7 (100%) | ||
| Ig strand C | 382..389 | CDD:409391 | 6/6 (100%) | ||
| Ig strand C' | 391..394 | CDD:409391 | 2/2 (100%) | ||
| Ig strand D | 407..412 | CDD:409391 | 4/4 (100%) | ||
| Ig strand E | 414..421 | CDD:409391 | 5/6 (83%) | ||
| Ig strand F | 427..436 | CDD:409391 | 8/8 (100%) | ||
| FN3 | 428..882 | CDD:442628 | 432/453 (95%) | ||
| Ig strand G | 438..449 | CDD:409391 | 10/10 (100%) | ||
| IgI_5_Robo | 459..545 | CDD:409544 | 81/85 (95%) | ||
| Ig strand A | 459..462 | CDD:409544 | 2/2 (100%) | ||
| Ig strand A' | 466..469 | CDD:409544 | 2/2 (100%) | ||
| Ig strand B | 475..482 | CDD:409544 | 4/6 (67%) | ||
| Ig strand C | 488..493 | CDD:409544 | 4/4 (100%) | ||
| Ig strand C' | 495..497 | CDD:409544 | 1/1 (100%) | ||
| Ig strand D | 504..508 | CDD:409544 | 3/3 (100%) | ||
| Ig strand E | 511..516 | CDD:409544 | 4/4 (100%) | ||
| Ig strand F | 524..532 | CDD:409544 | 6/7 (86%) | ||
| Ig strand G | 535..545 | CDD:409544 | 9/9 (100%) | ||
| FN3 | 564..650 | CDD:238020 | 82/85 (96%) | ||
| Robo1 | XP_063126810.1 | None | |||