Sequence 1: | XP_011532278.1 | Gene: | ROBO1 / 6091 | HGNCID: | 10249 | Length: | 1654 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
Alignment Length: | 1496 | Identity: | 438/1496 - (29%) |
---|---|---|---|
Similarity: | 648/1496 - (43%) | Gaps: | 292/1496 - (19%) |
- Green bases have known domain annotations that are detailed below.
Human 63 QEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSL 127
Human 128 FFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQ 192
Human 193 PPRGHPEPTISWKKDGSPLD---DKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVA 254
Human 255 ELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRK--DDGELPKSRYEIRDDHTLKI 317
Human 318 RKVTAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQ 382
Human 383 PAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGD----LTITNVQRSDVGYYI-CQTLNVAGSIIT 442
Human 443 KAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQ 507
Human 508 LENGVLQIR-YAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNL--------- 562
Human 563 -IPSAPSKPEVTDVSRNTVTLSWQPNLNSGATP-TSYIIEAFSHASGSSWQTVAENVKTETSAIK 625
Human 626 GLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVLPTSQGVDHKQVQREL---------GNAVL 681
Human 682 HLHNPTVLSSSSIEVHWTVDQQSQYIQGYKILYRPSGANHGESDWLVFEVRTPAKNSVVIPDLRK 746
Human 747 GVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPP-PEDTQN 810
Human 811 GMVQEYKVWCLG----NETRYHINKTVDGSTFSVVIPFLVPGIRYSVEVAASTGAGSGVKSEPQF 871
Human 872 IQLDAHGNPV-SPEDQVSLAQQIS-DVVKQPAFIAGIGAACWIILMVF-SIWLYRHRK--KRNGL 931
Human 932 TSTYAG-----IRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPAAQP----WLADT---WP 984
Human 985 NTGNNHNDCSISCC------------TAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPE 1037
Human 1038 STVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSGEKHW 1102
Human 1103 KPLGQQKQEVAPVQYNIVEQNKLNKDYRANDTVPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQG 1167
Human 1168 HKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVPPARMYLQQDE 1232
Human 1233 LEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSP--------QEELQPMLQDCPEETGHMQ 1289
Human 1290 HQ------PDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDT--DAPEEEEDEADMEVAKMQT 1346
Human 1347 RRLLLRGLEQ-TPASSVGDLESSVTGSM--INGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQ 1408
Human 1409 AVAAAAEY-AGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKLKHQPG 1472
Human 1473 H 1473 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ROBO1 | XP_011532278.1 | Ig1_Robo | 67..166 | CDD:143317 | 57/98 (58%) |
I-set | 68..165 | CDD:254352 | 56/96 (58%) | ||
I-set | 172..258 | CDD:254352 | 41/88 (47%) | ||
Ig2_Robo | 174..258 | CDD:143201 | 39/86 (45%) | ||
I-set | 262..347 | CDD:254352 | 30/86 (35%) | ||
Ig3_Robo | 279..347 | CDD:143202 | 26/69 (38%) | ||
I-set | 354..448 | CDD:254352 | 35/98 (36%) | ||
Ig4_Robo | 368..457 | CDD:143203 | 33/93 (35%) | ||
I-set | 458..545 | CDD:254352 | 35/87 (40%) | ||
Ig | 462..536 | CDD:299845 | 29/74 (39%) | ||
FN3 | 564..650 | CDD:238020 | 24/86 (28%) | ||
FN3 | 687..773 | CDD:238020 | 19/85 (22%) | ||
fn3 | 781..867 | CDD:278470 | 30/90 (33%) | ||
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 57/98 (58%) |
I-set | 23..116 | CDD:254352 | 56/96 (58%) | ||
I-set | 122..211 | CDD:254352 | 41/89 (46%) | ||
Ig | 125..211 | CDD:299845 | 39/86 (45%) | ||
I-set | 215..302 | CDD:254352 | 30/86 (35%) | ||
Ig | 232..302 | CDD:299845 | 26/69 (38%) | ||
I-set | 306..401 | CDD:254352 | 34/96 (35%) | ||
Ig | 320..411 | CDD:299845 | 33/93 (35%) | ||
I-set | 412..492 | CDD:254352 | 32/80 (40%) | ||
IGc2 | 429..489 | CDD:197706 | 23/60 (38%) | ||
FN3 | 519..612 | CDD:238020 | 28/92 (30%) | ||
FN3 | 644..735 | CDD:238020 | 21/93 (23%) | ||
fn3 | 743..832 | CDD:278470 | 30/90 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 104 | 1.000 | Domainoid score | I6690 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4222 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2206 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8568 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101537 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.670 |