DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF2 and Rnf2

DIOPT Version :10

Sequence 1:NP_009143.1 Gene:RNF2 / 6045 HGNCID:10061 Length:336 Species:Homo sapiens
Sequence 2:NP_001388309.1 Gene:Rnf2 / 304850 RGDID:1305491 Length:336 Species:Rattus norvegicus


Alignment Length:336 Identity:335/336 - (99%)
Similarity:336/336 - (100%) Gaps:0/336 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTK 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTK 65

Human    66 ECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLAR 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 ECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLAR 130

Human   131 INKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNK 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 INKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNK 195

Human   196 RTKTSDDSGLELDNNNAAMAIDPVMDGASEIELVFRPHPTLMEKDDSAQTRYIKTSGNATVDHLS 260
            ||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 RTKTSDDSGLELDNNNAAVAIDPVMDGASEIELVFRPHPTLMEKDDSAQTRYIKTSGNATVDHLS 260

Human   261 KYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNGSFSLELVSEKYWKVNKPM 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 KYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNGSFSLELVSEKYWKVNKPM 325

Human   326 ELYYAPTKEHK 336
            |||||||||||
  Rat   326 ELYYAPTKEHK 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF2NP_009143.1 Interaction with HIP2. /evidence=ECO:0000269|PubMed:11513855 2..179 176/176 (100%)
RING-HC_RING2 37..113 CDD:438398 75/75 (100%)
Interaction with nucleosomes via an acidic patch on histone H2A and histone H2B. /evidence=ECO:0000269|PubMed:25355358 93..98 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..208 50/50 (100%)
RAWUL_RING2 225..330 CDD:340687 104/104 (100%)
Rnf2NP_001388309.1 Interaction with HIP2. /evidence=ECO:0000250|UniProtKB:Q99496 2..179 176/176 (100%)
RING-HC_RING2 37..113 CDD:438398 75/75 (100%)
Interaction with nucleosomes via an acidic patch on histone H2A and histone H2B. /evidence=ECO:0000250|UniProtKB:Q99496 93..98 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..206 48/48 (100%)
RAWUL_RING2 225..330 CDD:340687 104/104 (100%)

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