DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNASEL and ern2

DIOPT Version :9

Sequence 1:NP_066956.1 Gene:RNASEL / 6041 HGNCID:10050 Length:741 Species:Homo sapiens
Sequence 2:NP_001072279.1 Gene:ern2 / 779732 XenbaseID:XB-GENE-4594134 Length:957 Species:Xenopus tropicalis


Alignment Length:426 Identity:111/426 - (26%)
Similarity:177/426 - (41%) Gaps:94/426 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   358 IGKLKFFIDEKYKIADTSEGG--IYLGFYEKQEVAVK-TFCEGSPRAQREVSCLQSSRENSHLVT 419
            :||:.|   ....:.....||  ::.|.::.:.|||| ...|....|.|||..|:.|.|:.:::.
 Frog   556 VGKISF---SPKDVLGHGAGGTCVFRGKFDDRAVAVKRILSESFTLADREVQLLRESDEHPNVIR 617

Human   420 FYGSESHRGHLFVCVTLCEQTLEACL---DVHR-GEDVENEEDEFARNVLSSIFKAVQELHLSCG 480
            :|.:||.:...::.:.||..||:..:   |:|| |.|        :..:|......:..|| |..
 Frog   618 YYCTESDKLFCYIALELCATTLQEYMKNPDLHRSGLD--------SVTLLHQTMSGLAHLH-SLN 673

Human   481 YTHQDLQPQNILIDSKKAAH------LADFDKSIKW----------AGDP-------QEVKR--- 519
            ..|:||:|.|||| |..:||      ::||....|.          :|.|       .||.|   
 Frog   674 IVHRDLKPCNILI-SYPSAHGKVRAVISDFGLCKKLSVGRNSFSLRSGIPGTEGWIAPEVLRDRP 737

Human   520 --------DLEDLGRLVLYVVKKGSISFED-LKAQSN----------------EEVVQLSPDEET 559
                    |:...|.:..||:.||...|.| |:.|||                |.||       .
 Frog   738 KQNPTAAVDIFSAGCVFYYVLSKGQHPFGDNLRRQSNILSGSYSLPKLQEDTHENVV-------A 795

Human   560 KDLIHRLFHPGEHVRDCLSDLLGHPFFWTWESRYRTLRNVGNESDIKTRKSESEILRLLQPGPSE 624
            :.|:..:.:....:|.....:|.|||||....|.:..::|.:.  |:...:||.|:..|:    .
 Frog   796 RHLVEMMINCDSLLRPTAEHVLIHPFFWAPAKRLQFFQDVSDR--IEKEPAESPIVVALE----S 854

Human   625 HSKSFDK--WTTKINECVMKKMNKFYEKRGNFYQNTVGDLLKFIRNLGEHIDEEKHKKMKL--KI 685
            .::|..:  |...|:..:...:.||...||    |:|.|||:.:||...|..|......:.  .|
 Frog   855 DARSVVRVNWRLHISVPLQTDLRKFRSYRG----NSVRDLLRAMRNKKHHYHELPADVQETLGSI 915

Human   686 GDPSL-YFQKTFPDLVIYVYTKLQNTEYRKHFPQTH 720
            .|..: ||...||.|:::.|..|:.....:.| ||:
 Frog   916 PDEFVSYFSSRFPYLLLHTYQALEQCSPERQF-QTY 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNASELNP_066956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
ANK repeat 24..56 CDD:293786
ANK 1 24..53
Ank_2 29..122 CDD:289560
ANK 2 58..87
ANK 59..188 CDD:238125
ANK repeat 59..89 CDD:293786
ANK repeat 91..122 CDD:293786
ANK 3 91..120
Ank_2 96..199 CDD:289560
ANK repeat 124..154 CDD:293786
ANK 4 124..153
ANK repeat 167..199 CDD:293786
ANK 5 167..197
Ank_2 172..270 CDD:289560
ANK 196..321 CDD:238125
ANK repeat 201..236 CDD:293786
ANK 6 201..234
2-5A binding (P-loop) 1 229..242
ANK 7 238..268
Ank_2 243..326 CDD:289560
2-5A binding (P-loop) 2 253..275
ANK repeat 272..326 CDD:293786
ANK 8 272..301
ANK 9 303..329
PKc_like 375..587 CDD:304357 71/269 (26%)
Pkinase 387..586 CDD:278497 67/254 (26%)
RNase_RNase-L 590..708 CDD:199218 31/122 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..741 3/6 (50%)
ern2NP_001072279.1 Luminal_IRE1 34..302 CDD:188875
STKc_IRE1 558..823 CDD:270884 73/284 (26%)
RNase_Ire1 826..951 CDD:199217 35/136 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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