DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNASEL and pak2

DIOPT Version :9

Sequence 1:NP_066956.1 Gene:RNASEL / 6041 HGNCID:10050 Length:741 Species:Homo sapiens
Sequence 2:XP_002935145.1 Gene:pak2 / 733718 XenbaseID:XB-GENE-966302 Length:518 Species:Xenopus tropicalis


Alignment Length:409 Identity:84/409 - (20%)
Similarity:155/409 - (37%) Gaps:84/409 - (20%)


- Green bases have known domain annotations that are detailed below.


Human   237 ERGKTP-LILAV----EKKHLGLVQRLLEQEHIEINDTDSDG-KTALLLAVELKLKKIAELLCKR 295
            |:.|.| .:|.|    :.||..      :|:::..:..|.|| .:.:..|...|..:.:......
 Frog   109 EQKKNPQAVLDVLKFYDSKHTD------KQKYLSFSAPDKDGLPSGVSSAPNAKGSEPSTAATDD 167

Human   296 GASTDCGDLVMTARRNYDHSLVKVLLSHGAKEDFHPPAEDWKPQSSHWGAALKDLHRIYRPMIGK 360
            .:..|.....:.|.|. :|:  |.:.:....:...||..|....:.......|........::.|
 Frog   168 DSDDDKAPPPVIAPRP-EHT--KSMYTRSVIDPIPPPPGDSDSAAKAGDRQKKKTKMSDEEIMEK 229

Human   361 LKFFID-----EKY----KIADTSEGGIY--LGFYEKQEVAVKTF-CEGSPRAQREVSCLQSSRE 413
            |:..:.     :||    ||...:.|.::  :.....||||:|.. .:..|:.:..::.:...:|
 Frog   230 LRTIVSIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKE 294

Human   414 --NSHLVTFYGSESHRGHLFVCV------TLCEQTLEACLDVHRGEDVENEEDEFARNVLSSIFK 470
              |.::|.|..|......|:|.:      :|.:...|.|:|          |.:.|. |.....:
 Frog   295 LKNPNIVNFLDSFLVSDELYVVMEYLAGGSLTDVVTETCMD----------EAQIAA-VCRECLQ 348

Human   471 AVQELHLSCGYTHQDLQPQNILIDSKKAAHLADF----------DKSIKWAGDP----QEV---- 517
            |::.||.: ...|:|::..|:|:....:..|.||          .|.....|.|    .||    
 Frog   349 ALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 412

Human   518 ----KRDLEDLGRLVLYVVKKGS---ISFEDLKA----QSN-----EEVVQLSPDEETKDLIHRL 566
                |.|:..||.:.:.:| :|.   ::...|:|    .:|     ::..:|||  ..:|.::|.
 Frog   413 AYGPKVDIWSLGIMAIEMV-EGEPPYLNENPLRALYLIATNGTPELQKPEKLSP--IFRDFLNRS 474

Human   567 FHPGEHVRDCLSDLLGHPF 585
            .......|....:||.|||
 Frog   475 LEMDVEKRGSARELLQHPF 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNASELNP_066956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
ANK repeat 24..56 CDD:293786
ANK 1 24..53
Ank_2 29..122 CDD:289560
ANK 2 58..87
ANK 59..188 CDD:238125
ANK repeat 59..89 CDD:293786
ANK repeat 91..122 CDD:293786
ANK 3 91..120
Ank_2 96..199 CDD:289560
ANK repeat 124..154 CDD:293786
ANK 4 124..153
ANK repeat 167..199 CDD:293786
ANK 5 167..197
Ank_2 172..270 CDD:289560 8/37 (22%)
ANK 196..321 CDD:238125 18/89 (20%)
ANK repeat 201..236 CDD:293786
ANK 6 201..234
2-5A binding (P-loop) 1 229..242 2/4 (50%)
ANK 7 238..268 7/34 (21%)
Ank_2 243..326 CDD:289560 15/87 (17%)
2-5A binding (P-loop) 2 253..275 4/22 (18%)
ANK repeat 272..326 CDD:293786 9/54 (17%)
ANK 8 272..301 4/29 (14%)
ANK 9 303..329 4/25 (16%)
PKc_like 375..587 CDD:304357 56/256 (22%)
Pkinase 387..586 CDD:278497 55/242 (23%)
RNase_RNase-L 590..708 CDD:199218
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..741
pak2XP_002935145.1 PBD 67..121 CDD:334253 4/11 (36%)
STKc_PAK2 223..518 CDD:132986 62/286 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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