DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RNASEL and trp-4

DIOPT Version :9

Sequence 1:NP_066956.1 Gene:RNASEL / 6041 HGNCID:10050 Length:741 Species:Homo sapiens
Sequence 2:NP_493429.2 Gene:trp-4 / 190574 WormBaseID:WBGene00006616 Length:1924 Species:Caenorhabditis elegans


Alignment Length:732 Identity:154/732 - (21%)
Similarity:251/732 - (34%) Gaps:205/732 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    25 DNHLLIK-AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS---REDIVELLLRHGADP 85
            ||:..:. |||:....:|:.||..||:::.:..|.|.|.||.|..::   ..|...:||:.|..|
 Worm   658 DNYTALHVAVQSGKASVVETLLGSGADIHVKGGELGQTALHIAASLNGAESRDCAMMLLKSGGQP 722

Human    86 VLRKKNGATPFILAAIAGSVKLLKLFLSKGAD---------------VNECDFY----------- 124
            .:.:.:|.|...:||.:|:..:::|.|.:.||               ...|:|.           
 Worm   723 DVAQMDGETCLHIAARSGNKDIMRLLLDENADSKISSKIGETPLQVAAKSCNFEAASMILKHLSE 787

Human   125 -----------------GFTAFMEAAVYGK---------VKALKFLYKRGANVNLRRKTKED--- 160
                             ||||...||...:         .|.:..|...|..|.:......:   
 Worm   788 VLTQEQLKEHVNHRTNDGFTALHYAAEIEQRQLHFPGEDAKLVNLLIDYGGMVEMPSLNANETAM 852

Human   161 ---------------------------QERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC 198
                                       |.:..|.|.:.|::|..:||..|..||| :..|.::..
 Worm   853 HMAARSGNQAVLLAMVNKIGAGAVQIVQNKQSKNGWSPLLEACARGHSGVANILL-KHHARIDVF 916

Human   199 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH 263
            |.|||.||..|..:...|    :.||||.|.|.||.:.:.|:.||.||.:..|:.:|..|::...
 Worm   917 DEMGRTALHLAAFNGHLS----LVHLLLQHKAFVNSKSKTGEAPLHLAAQHGHVKVVNVLVQDHG 977

Human   264 IEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD------LVMTARRNYDHSLVKVLLS 322
            ..:.....|.:|||..|.:.....:::.|...||:.:..|      |.:.|..::. .:||:.|.
 Worm   978 AALEAITLDNQTALHFAAKFGQLAVSQTLLALGANPNARDDKGQTPLHLAAENDFP-DVVKLFLK 1041

Human   323 HGAKEDFHPPAEDWKPQSSHWG-------------AALKDLHRIYRPMIGKLKFFIDEKYKIADT 374
            ..........|.|      |.|             |.:::|..|.:||:.:.|....|...:...
 Worm  1042 MRNNNRSVLTAID------HNGFTCAHIAAMKGSLAVVRELMMIDKPMVIQAKTKTLEATTLHMA 1100

Human   375 SEGGIYLGFYEKQEVAVKTFCEGSPRAQRE----------------VSCLQS---------SREN 414
            :.||        ....||...|....|:.|                :|.|::         ||:.
 Worm  1101 AAGG--------HANIVKILLENGANAEDENSHGMTALHLGAKNGFISILEAFDKILWKRCSRKT 1157

Human   415 S----HLVTFYGSESHRGHLFVCVTLCEQTLEACLDVHRGEDVENE-------------EDEFAR 462
            .    |:..|||:......:...|....::.....:.|..::...|             .|...|
 Worm  1158 GLNALHIAAFYGNSDFVNEMLKHVQATVRSEPPIYNHHVNKEFSTEYGFTPLHLAAQSGHDSLVR 1222

Human   463 NVL--------SSIFKAVQELHLSCGYTHQDLQPQNILIDSKKAAHLADFDKSIKWAG-DPQEVK 518
            .:|        :|....|..|||:....|..:... :|..|.:..|..|      |.| .|..:.
 Worm  1223 MLLNQGVQVDATSTTMNVIPLHLAAQQGHIAVVGM-LLSRSTQQQHAKD------WRGRTPLHLA 1280

Human   519 RDLEDLGRLVLYVVKKGSISFEDLKA---------QSNEEVVQL------SPDEETKD----LIH 564
            ........:.|.:.:..:|:..|...         ..:..||:|      .|..|||:    |..
 Worm  1281 AQNGHYEMVSLLIAQGSNINVMDQNGWTGLHFATRAGHLSVVKLFIDSSADPLAETKEGKVPLCF 1345

Human   565 RLFHPGEHVRDCLSDLL 581
            ...|  .|: :||..||
 Worm  1346 AAAH--NHI-ECLRFLL 1359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNASELNP_066956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
ANK repeat 24..56 CDD:293786 10/31 (32%)
ANK 1 24..53 10/28 (36%)
Ank_2 29..122 CDD:289560 28/111 (25%)
ANK 2 58..87 10/31 (32%)
ANK 59..188 CDD:238125 40/213 (19%)
ANK repeat 59..89 CDD:293786 10/32 (31%)
ANK repeat 91..122 CDD:293786 9/45 (20%)
ANK 3 91..120 9/43 (21%)
Ank_2 96..199 CDD:289560 31/184 (17%)
ANK repeat 124..154 CDD:293786 10/66 (15%)
ANK 4 124..153 10/65 (15%)
ANK repeat 167..199 CDD:293786 10/31 (32%)
ANK 5 167..197 10/29 (34%)
Ank_2 172..270 CDD:289560 33/97 (34%)
ANK 196..321 CDD:238125 37/130 (28%)
ANK repeat 201..236 CDD:293786 15/34 (44%)
ANK 6 201..234 14/32 (44%)
2-5A binding (P-loop) 1 229..242 4/12 (33%)
ANK 7 238..268 8/29 (28%)
Ank_2 243..326 CDD:289560 20/88 (23%)
2-5A binding (P-loop) 2 253..275 3/21 (14%)
ANK repeat 272..326 CDD:293786 14/59 (24%)
ANK 8 272..301 8/28 (29%)
ANK 9 303..329 6/31 (19%)
PKc_like 375..587 CDD:304357 51/277 (18%)
Pkinase 387..586 CDD:278497 49/265 (18%)
RNase_RNase-L 590..708 CDD:199218
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..741
trp-4NP_493429.2 ANK repeat 804..842 CDD:293786 10/37 (27%)
ANK repeat 849..884 CDD:293786 1/34 (3%)
ANK repeat 886..917 CDD:293786 10/31 (32%)
ANK repeat 919..950 CDD:293786 15/34 (44%)
ANK repeat 952..982 CDD:293786 8/29 (28%)
ANK repeat 986..1017 CDD:293786 8/30 (27%)
PHA03095 1006..>1336 CDD:222980 61/351 (17%)
ANK repeat 1092..1123 CDD:293786 7/38 (18%)
ANK repeat 1204..1236 CDD:293786 3/31 (10%)
trp 1209..1879 CDD:273311 33/161 (20%)
ANK repeat 1238..1270 CDD:293786 8/32 (25%)
ANK repeat 1272..1303 CDD:293786 4/30 (13%)
ANK repeat 1305..1336 CDD:293786 4/30 (13%)
ANK repeat 1338..1366 CDD:293786 7/25 (28%)
ANKYR 280..515 CDD:223738
ANK repeat 352..383 CDD:293786
ANK repeat 385..418 CDD:293786
ANK repeat 424..454 CDD:293786
PHA03095 430..>756 CDD:222980 30/97 (31%)
ANK repeat 456..489 CDD:293786
ANK repeat 491..523 CDD:293786
ANK repeat 526..556 CDD:293786
ANK repeat 558..590 CDD:293786
ANK repeat 592..623 CDD:293786
ANK repeat 625..656 CDD:293786
ANK repeat 658..688 CDD:293786 10/29 (34%)
ANK repeat 692..726 CDD:293786 10/33 (30%)
PHA02876 <712..>1040 CDD:165207 74/333 (22%)
ANK repeat 728..753 CDD:293786 7/24 (29%)
ANK repeat 761..802 CDD:293786 2/40 (5%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4177
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.