DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RNASEL and nphp-2

DIOPT Version :9

Sequence 1:NP_066956.1 Gene:RNASEL / 6041 HGNCID:10050 Length:741 Species:Homo sapiens
Sequence 2:NP_001300226.1 Gene:nphp-2 / 178671 WormBaseID:WBGene00021304 Length:834 Species:Caenorhabditis elegans


Alignment Length:753 Identity:162/753 - (21%)
Similarity:284/753 - (37%) Gaps:164/753 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    15 SSSGRRAAVED---NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVE 76
            :::|..|...|   .:.|..||....:|.:...:.....||.:::....||||.|.  ..|||..
 Worm    90 ANTGADAECHDEQGRNALHWAVVCGQLDSLNWAINKNVEVNAKDQYQRCTPLHYAT--CSEDIAP 152

Human    77 --------LLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAA 133
                    .||:|||||.....:..||....:..|:::.:|...:.|.|:...|....|....||
 Worm   153 EVSQAILITLLKHGADPNAIDADDRTPIHWCSSNGNLEAIKALYNSGGDLLCRDKEHLTILHCAA 217

Human   134 VYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE-VLKILLDEMGADVNA 197
            .:|..:.::|..|   :||     |...:.:.:.|.|||..|...||.| .||:|.:      ||
 Worm   218 SHGYHEVIEFALK---HVN-----KPFIDEIDRAGHTALFYAISFGHYESALKLLQN------NA 268

Human   198 CDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE 262
            ..|.....|..|..|:.......:..||....|..:::..||..|...||:.....:|:.||..:
 Worm   269 NPNHQDQRLATAAHSAASKGQMRMLKLLKQFNASFDIQNYRGDLPFHEAVQAGSKDVVEWLLAVD 333

Human   263 HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD--CG-------DLVMTARRNY---DHS 315
            ...::..:.:|:||:.||..:...::..|||.:....|  |.       .|.:..::|:   ...
 Worm   334 ESVLDIPNHNGRTAIHLAASVGNLEMVILLCTKKCFVDPLCSREKEIFTPLDLATKQNHVVVVEY 398

Human   316 LVKVLLSHGAKEDFHPP-AEDWKPQSSHWGAALKDLHRIYRPMIGKLKFFIDEKYKIADTSEGGI 379
            |.|:..:..:|| |.|. .|:||   :::.|.:.:..|....:..:.|     |.:...||:|  
 Worm   399 LTKLCRAKSSKE-FSPEYIENWK---TNFEAMVAEARRKRNELKAEQK-----KQRRPSTSDG-- 452

Human   380 YLGFYEKQEVA----------VKTFCEGSPR------------------AQREVSCLQSSRENSH 416
            .:....|:|:|          :|:....:|:                  .::|:..|:.|.||..
 Worm   453 IVETERKKEIADVGVNTSQRSIKSADSNAPKRKYSKSTSVTNLTEIPSIPKKELEALKESIENGQ 517

Human   417 LVTFYGSESHRGHLFV---------CVTLCEQTLEACLDVHRGEDVENEEDEFARNVLSSIFKAV 472
            ......:|.|...|.|         ...|.|.:.....|   .|:.::::::..|.|.....||.
 Worm   518 KFVDDDAEDHLDILDVDDEFENLPPISDLSESSTSTDND---SEEDKSDDEDVERKVTVQETKAT 579

Human   473 QELHLSCGYTHQDLQPQNILIDSKKAAHLADFDKSIKWAGD-PQEVKRDLE---DLGRLVLYVVK 533
            ..| .:...|.::::.::.....||:|.        |..|: ...|:|:.|   |.|.:.:|...
 Worm   580 VPL-AAAKKTRKEVRIESGSNKKKKSAS--------KSRGNVVMRVRREPEVGSDTGDVDIYDDG 635

Human   534 KGSISFEDLKAQSNEEVVQLSPD-------------------------------EETKDLIHRLF 567
            .|..|.::.:.:.|::....:|.                               :..:.|....:
 Worm   636 DGRPSDDEEEKKPNDKETASTPTNRRYIHERAIFQELTHLKRMQIQYGKVLIARKNARALFRNYY 700

Human   568 HPGEH-------VRDCLS--------DLLGHPF--FWTWESRYRTLRNVGNES----DIKTRKSE 611
            |||..       ||..:|        |:....|  |:.||   |.|.:..:|.    .::.|:..
 Worm   701 HPGTEQVQEKVLVRSLISNFCKMHNLDVRNFKFTTFYAWE---RFLYDALSEQLKIIYLEERERL 762

Human   612 SEILRLLQPGPSEHSKSFDKWTTKINECVMKKMNKFYE 649
            ||....::|..|.....||   :||...|... :||::
 Worm   763 SETNSEMKPSGSMKLNKFD---SKIRNSVPIN-DKFHD 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNASELNP_066956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 1/5 (20%)
ANK repeat 24..56 CDD:293786 7/34 (21%)
ANK 1 24..53 6/31 (19%)
Ank_2 29..122 CDD:289560 27/100 (27%)
ANK 2 58..87 15/36 (42%)
ANK 59..188 CDD:238125 41/137 (30%)
ANK repeat 59..89 CDD:293786 15/37 (41%)
ANK repeat 91..122 CDD:293786 6/30 (20%)
ANK 3 91..120 6/28 (21%)
Ank_2 96..199 CDD:289560 27/103 (26%)
ANK repeat 124..154 CDD:293786 8/29 (28%)
ANK 4 124..153 7/28 (25%)
ANK repeat 167..199 CDD:293786 13/32 (41%)
ANK 5 167..197 11/30 (37%)
Ank_2 172..270 CDD:289560 25/98 (26%)
ANK 196..321 CDD:238125 31/136 (23%)
ANK repeat 201..236 CDD:293786 6/34 (18%)
ANK 6 201..234 6/32 (19%)
2-5A binding (P-loop) 1 229..242 3/12 (25%)
ANK 7 238..268 8/29 (28%)
Ank_2 243..326 CDD:289560 19/94 (20%)
2-5A binding (P-loop) 2 253..275 4/21 (19%)
ANK repeat 272..326 CDD:293786 14/65 (22%)
ANK 8 272..301 9/30 (30%)
ANK 9 303..329 6/28 (21%)
PKc_like 375..587 CDD:304357 50/300 (17%)
Pkinase 387..586 CDD:278497 47/287 (16%)
RNase_RNase-L 590..708 CDD:199218 16/64 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..741
nphp-2NP_001300226.1 ANK repeat 39..67 CDD:293786
PHA02874 46..>361 CDD:165205 73/286 (26%)
ANK repeat 69..100 CDD:293786 2/9 (22%)
ANK repeat 103..133 CDD:293786 6/29 (21%)
ANK repeat 135..173 CDD:293786 15/39 (38%)
ANK repeat 175..206 CDD:293786 6/30 (20%)
Ank_2 180..274 CDD:372319 28/107 (26%)
ANK repeat 208..241 CDD:293786 9/40 (23%)
ANK repeat 243..274 CDD:293786 14/36 (39%)
ANK repeat 276..307 CDD:293786 6/30 (20%)
ANK repeat 343..377 CDD:293786 10/33 (30%)
PTZ00108 <414..650 CDD:240271 47/257 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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