DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNASEL and T28D6.4

DIOPT Version :9

Sequence 1:NP_066956.1 Gene:RNASEL / 6041 HGNCID:10050 Length:741 Species:Homo sapiens
Sequence 2:NP_499461.1 Gene:T28D6.4 / 176566 WormBaseID:WBGene00012124 Length:991 Species:Caenorhabditis elegans


Alignment Length:461 Identity:130/461 - (28%)
Similarity:196/461 - (42%) Gaps:96/461 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    17 SGRRAAVEDNHLLIKA---VQNED---------------VDLVQQLLEGGANVNFQEEEGGWTPL 63
            ||:.|||:   ||::.   |...|               .|:|..:::.||:||..::.|. |.|
 Worm   501 SGQLAAVQ---LLLQTGAEVDRRDSEQRTALMAAAFMCHKDVVSVIIQYGADVNAIDKSGA-TAL 561

Human    64 H-----NAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDF 123
            |     .:.|....:..:|||.|.||..:...||.....|||..|. ..|:|.|.|...|:..|.
 Worm   562 HLNLSNGSKQEENSETTKLLLEHNADCKIEDANGRVALHLAAYHGD-PCLQLILEKHPIVDVMDN 625

Human   124 YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILL 188
            .|.|..|.||..|:::|::||.|         ..|.|.:.:...|.|||..||..||.||::.|.
 Worm   626 MGQTPLMLAASQGQLEAVQFLTK---------TAKADVDAIDNNGRTALQWAAINGHPEVVEFLC 681

Human   189 DEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLG 253
             .:|:|....||.|..|| |..::.|  .||.:.||...|  .|..:...|:.|:::|....:|.
 Worm   682 -SVGSDEGHKDNDGAVAL-HYAVTHD--HVELVKHLTNQH--TVEAKDRYGQHPMMIAAANGNLK 740

Human   254 LVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYD----- 313
            :::.|:....| ||..|.:|:|||.||.......|.:|:..|  .||      .::|::|     
 Worm   741 VLEYLMGISDI-INQPDHEGRTALSLASMAAHTSIIDLISPR--ITD------WSQRDHDGTPLA 796

Human   314 HSLV--------KVLLSHGAK---EDFHPPAEDWKPQSSHWGAALKDLHRIYRPMIGKLKFFIDE 367
            |:|:        :|.|.|||.   .|.|.........|::..||.|.|.|     ||.:.|    
 Worm   797 HTLILSNLIFVAEVYLGHGANSSDSDAHGRTCVHVVASTNDVAAAKMLKR-----IGGVNF---- 852

Human   368 KYKIADTSEGG---IYLGFYEKQEVAVKTF----CEGSP-RAQRE------VSCLQSSRENSHLV 418
                .....||   :....:.| .||:..|    |...| |..|:      ::.....|:..:|:
 Worm   853 ----EAVDRGGRTALMTAVWAK-HVAISVFLLDSCGVDPNRTDRQGATALSIAAQIGDRDLVNLL 912

Human   419 TFYGSE 424
            ..:|:|
 Worm   913 LKFGAE 918

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNASELNP_066956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 2/3 (67%)
ANK repeat 24..56 CDD:293786 10/49 (20%)
ANK 1 24..53 9/46 (20%)
Ank_2 29..122 CDD:289560 31/115 (27%)
ANK 2 58..87 11/33 (33%)
ANK 59..188 CDD:238125 44/133 (33%)
ANK repeat 59..89 CDD:293786 10/34 (29%)
ANK repeat 91..122 CDD:293786 11/30 (37%)
ANK 3 91..120 11/28 (39%)
Ank_2 96..199 CDD:289560 35/102 (34%)
ANK repeat 124..154 CDD:293786 10/29 (34%)
ANK 4 124..153 10/28 (36%)
ANK repeat 167..199 CDD:293786 13/31 (42%)
ANK 5 167..197 13/29 (45%)
Ank_2 172..270 CDD:289560 31/97 (32%)
ANK 196..321 CDD:238125 38/137 (28%)
ANK repeat 201..236 CDD:293786 11/34 (32%)
ANK 6 201..234 11/32 (34%)
2-5A binding (P-loop) 1 229..242 2/12 (17%)
ANK 7 238..268 7/29 (24%)
Ank_2 243..326 CDD:289560 26/95 (27%)
2-5A binding (P-loop) 2 253..275 6/21 (29%)
ANK repeat 272..326 CDD:293786 19/66 (29%)
ANK 8 272..301 10/28 (36%)
ANK 9 303..329 9/41 (22%)
PKc_like 375..587 CDD:304357 14/64 (22%)
Pkinase 387..586 CDD:278497 11/49 (22%)
RNase_RNase-L 590..708 CDD:199218
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..741
T28D6.4NP_499461.1 Ank_2 428..521 CDD:372319 8/22 (36%)
ANK repeat 428..454 CDD:293786
ANK repeat 459..488 CDD:293786
ANK repeat 490..521 CDD:293786 8/22 (36%)
PHA03095 507..>776 CDD:222980 88/289 (30%)
ANK repeat 523..554 CDD:293786 6/30 (20%)
ANK repeat 556..592 CDD:293786 11/36 (31%)
ANK repeat 594..624 CDD:293786 11/30 (37%)
ANK repeat 626..658 CDD:293786 12/40 (30%)
ANK repeat 660..691 CDD:293786 13/31 (42%)
PHA03095 675..>943 CDD:222980 72/273 (26%)
ANK repeat 725..756 CDD:293786 8/31 (26%)
ANK repeat 824..856 CDD:293786 10/44 (23%)
ANK repeat 858..890 CDD:293786 9/32 (28%)
ANK repeat 892..923 CDD:293786 4/27 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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