DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNASEL and mel-11

DIOPT Version :9

Sequence 1:NP_066956.1 Gene:RNASEL / 6041 HGNCID:10050 Length:741 Species:Homo sapiens
Sequence 2:NP_001021928.1 Gene:mel-11 / 174484 WormBaseID:WBGene00003196 Length:1124 Species:Caenorhabditis elegans


Alignment Length:657 Identity:133/657 - (20%)
Similarity:236/657 - (35%) Gaps:167/657 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR 88
            :|:.:.:.|..:.|.:.|::||..|||:|....: |.|.||.:|..|:.::|..|...|||...:
 Worm    54 QDSDIFLSACMSGDEEEVEELLNKGANINTCTVD-GLTALHQSVIDSKPEMVRFLCEKGADVNAQ 117

Human    89 KKNGATPFILAAIAGSVKLLKLFLSKGADVN----------------EC------DFYGFTAFME 131
            ...|.||...||..|:|.:::.....|||::                :|      |:......::
 Worm   118 DNEGWTPLHAAACCGNVAIVRYLCQHGADLSIVNSDKELALDLAVDEQCRDYLDDDYKRQMIDLD 182

Human   132 AAVYGKVKALKFLYKRGANVNLRRKTKE--DQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD 194
            |.   :.:.|:.:.|   :||:.....|  |....|.|| ||:..||.:|:.::|::|: :.|.:
 Worm   183 AC---RDQELQTMLK---DVNMWMSQGEYRDIPHHRTGG-TAMHVAAGRGYTQLLELLI-KAGGN 239

Human   195 VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL 259
            |.|.|..|...| ||.....:.|.   ..:||::||:::.....|...|.:| :|:.:..:..|.
 Worm   240 VRAQDVEGWTPL-HAAAHWAERDA---CKILLENGAELSDLTFTGADVLGVA-DKECIDYLVELA 299

Human   260 EQEHIEINDTDSDGK-----TALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYD------ 313
            :...:: |...|.|.     |::|.....::....|             .|:|:.|..|      
 Worm   300 DTVKVQ-NKRKSPGSGSQPPTSILQEKNHRMPSHEE-------------HVLTSERKRDLQHKDQ 350

Human   314 HSLVKVLLSHGAKEDFHPPAEDWKPQSSHWGAALKDLHRIYRPMIGKLKFFIDEKYKIADTSEGG 378
            ||..:.|.||              |.::..|:...                     ...:|:...
 Worm   351 HSENEFLHSH--------------PSTASVGSTTS---------------------SNTNTTTTT 380

Human   379 IYLGFYEKQEVAVKTFCEGSPRAQREVSCLQSSRENSHLVTFYGSESHRGHLFVCVTLCEQTLEA 443
            |.:|                   :.::|..|.....|...:....|.:         :.|..:|.
 Worm   381 IVIG-------------------ENDISAAQKDSRESSKESAVDDEEY---------VAEDEMEE 417

Human   444 CLDVHRGEDVENEEDEFARNVLSSIFKAVQELHLSC-------------GYTHQDLQPQNILIDS 495
            ..:....||||.||:|.:...|.: .|.:..|....             |||.:....:....:.
 Worm   418 AEEDEEEEDVEEEEEEKSEAELKN-GKEISPLRSETTSSRSISITRSLDGYTDRSSSGRETSAEM 481

Human   496 KKAAHLAD---FDKSIKWAGDPQEVKRDLEDLGRLVLYVVKKGSISFEDLKAQSNEEVVQLSPDE 557
            .:||..|.   ...|.::.......:|.            ..||:..|..::.........|.|:
 Worm   482 SEAASSASTGTTSSSSRFTSSTPSSQRS------------AAGSVHTETPRSSMENSSSVGSGDQ 534

Human   558 ETKDLIH--RLFHPGEHVRDCLSDLLGHPFFWTWESRYRTLRNVGNESDIKTRKSESEILRLLQP 620
            .....|.  .|..|.:.|....|         :|.:|...|.:..:.|.: ||.|.:.:..::.|
 Worm   535 NVSATIPIVPLSAPPKAVHQSPS---------SWINRGVPLSSRSSTSSV-TRSSSTPVSEIISP 589

Human   621 GPSEHSK 627
            ..|.||:
 Worm   590 PSSIHSQ 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNASELNP_066956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
ANK repeat 24..56 CDD:293786 10/31 (32%)
ANK 1 24..53 9/28 (32%)
Ank_2 29..122 CDD:289560 31/114 (27%)
ANK 2 58..87 11/28 (39%)
ANK 59..188 CDD:238125 39/152 (26%)
ANK repeat 59..89 CDD:293786 11/29 (38%)
ANK repeat 91..122 CDD:293786 11/52 (21%)
ANK 3 91..120 10/44 (23%)
Ank_2 96..199 CDD:289560 29/126 (23%)
ANK repeat 124..154 CDD:293786 5/29 (17%)
ANK 4 124..153 4/28 (14%)
ANK repeat 167..199 CDD:293786 12/31 (39%)
ANK 5 167..197 11/29 (38%)
Ank_2 172..270 CDD:289560 24/97 (25%)
ANK 196..321 CDD:238125 28/135 (21%)
ANK repeat 201..236 CDD:293786 9/34 (26%)
ANK 6 201..234 9/32 (28%)
2-5A binding (P-loop) 1 229..242 3/12 (25%)
ANK 7 238..268 5/29 (17%)
Ank_2 243..326 CDD:289560 19/93 (20%)
2-5A binding (P-loop) 2 253..275 4/26 (15%)
ANK repeat 272..326 CDD:293786 13/64 (20%)
ANK 8 272..301 4/33 (12%)
ANK 9 303..329 9/31 (29%)
PKc_like 375..587 CDD:304357 36/229 (16%)
Pkinase 387..586 CDD:278497 34/216 (16%)
RNase_RNase-L 590..708 CDD:199218 10/38 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..741
mel-11NP_001021928.1 PHA03095 60..>280 CDD:222980 62/232 (27%)
Ank_2 62..151 CDD:372319 30/89 (34%)
ANK repeat 87..118 CDD:293786 11/31 (35%)
ANK repeat 120..151 CDD:293786 10/30 (33%)
ANK repeat 153..244 CDD:293786 22/98 (22%)
ANK repeat 246..271 CDD:293786 7/28 (25%)
ANK repeat 279..306 CDD:293786 5/28 (18%)
PRKG1_interact 1011..1123 CDD:374206
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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