DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RNASEL and tnks

DIOPT Version :9

Sequence 1:NP_066956.1 Gene:RNASEL / 6041 HGNCID:10050 Length:741 Species:Homo sapiens
Sequence 2:XP_004911090.1 Gene:tnks / 100497226 XenbaseID:XB-GENE-5828012 Length:1306 Species:Xenopus tropicalis


Alignment Length:708 Identity:171/708 - (24%)
Similarity:257/708 - (36%) Gaps:231/708 - (32%)


- Green bases have known domain annotations that are detailed below.


Human     8 NPQEGPTSS------------SGRRAAVEDN-HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEG- 58
            :|.|.|.|.            .|..:||... ..|.:|.:|.||..|::|||.| |||.::..| 
 Frog   130 SPAESPESGVIGGVGSGGIGPGGPLSAVSGAFRELFEACRNGDVSRVRRLLEPG-NVNAKDMAGR 193

Human    59 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDF 123
            ..||||.|....|:|:||.||:.||:...|...|..|...|...|..:::.|.|.:|||.|..|.
 Frog   194 KSTPLHFAAGFGRKDVVEHLLQTGANVHARDDGGLIPLHNACSFGHAEVVTLLLCQGADPNARDN 258

Human   124 YGFTAFMEAAVYGKVKALKFLYKRGANVNLRR--------------------KTKEDQ------- 161
            :.:|...||::.||:.....|.:.||:.::|.                    :.|:|:       
 Frog   259 WNYTPLHEASIKGKIDVCIVLLQHGADPSIRNTDGKSALDLADPSAKAVLTGEYKKDELLEAARS 323

Human   162 ----------------------------------ERLR----------------KGGATALMDAA 176
                                              .|:|                |||...|.:|.
 Frog   324 GNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNAC 388

Human   177 EKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD---VNVRG-- 236
            ..||.||.::|| :.||.|||.| :.:...:|...|.:..:|   ..|||.||||   ||..|  
 Frog   389 SYGHFEVTELLL-KHGACVNAMD-LWQFTPLHEAASKNRVEV---CSLLLSHGADPTLVNCHGKS 448

Human   237 --ERGKTP--------------LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAV---E 282
              :...||              |:.|..:..:..|::.|..|.|......|. :|||..||   .
 Frog   449 AVDMAPTPELKERLSYEFKGHSLLQAAREADMAKVKKTLALEIINFKQPQSH-ETALHCAVASLH 512

Human   283 LKLKKIAELLCKRGASTD------CGDLVMTARRNYDHSLVKVLLSHGAKEDFHPPAEDWKPQSS 341
            .|.|:|.|||.::|||.:      ...|.:.|.|.: :.:|:||..||||.:    |.|...|::
 Frog   513 PKRKQITELLLRKGASVNEKNKDFMTPLHVAAERAH-NDVVEVLHKHGAKMN----ALDTLGQTA 572

Human   342 HWGAALKDLHRIYRPMIG--------KLKFFI-----------------------DEKYKIADTS 375
            ...|||....:..|.::.        .|:.|.                       |..|::.:.|
 Frog   573 LHRAALGGHLQTCRLLLSFGSDASIVSLQGFTAAQMGNEAVQQILNVESTPVRTSDVDYRLLEAS 637

Human   376 EGGIYLGFYEKQEVAVKTFCEGSPRAQREVSCLQSSRENS---HLVTFYGSESHRGHLFVCVTLC 437
            :.|        ....||..|     :.:.|:|......:|   |....|..          |::.
 Frog   638 KAG--------DLDTVKQLC-----SSQNVNCRDLEGRHSTPLHFAAGYNR----------VSVV 679

Human   438 EQTLEACLDVHRGEDVENEEDEFARNVLSSIFKAVQELHLSCGYTHQDLQPQNILIDSKKAAHLA 502
            |..|      |.|.||..::.           ..:..||.:|.|.|.::  ..:|:....:.::|
 Frog   680 EYLL------HHGADVHAKDK-----------GGLVPLHNACSYGHYEV--AELLVRHGASVNVA 725

Human   503 DFDK------------------SIKWAGDPQEVKRDLEDLGRLVLYVVKKGSISFEDL 542
            |..|                  .:|...||.:..||    |...|.:||.|....:||
 Frog   726 DLWKFTPLHEAAAKGKYEICKLLLKHGADPTKKNRD----GNTPLDLVKDGDTDIQDL 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNASELNP_066956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 5/24 (21%)
ANK repeat 24..56 CDD:293786 13/32 (41%)
ANK 1 24..53 12/29 (41%)
Ank_2 29..122 CDD:289560 38/93 (41%)
ANK 2 58..87 14/29 (48%)
ANK 59..188 CDD:238125 47/205 (23%)
ANK repeat 59..89 CDD:293786 13/29 (45%)
ANK repeat 91..122 CDD:293786 10/30 (33%)
ANK 3 91..120 9/28 (32%)
Ank_2 96..199 CDD:289560 38/179 (21%)
ANK repeat 124..154 CDD:293786 8/29 (28%)
ANK 4 124..153 8/28 (29%)
ANK repeat 167..199 CDD:293786 15/31 (48%)
ANK 5 167..197 13/29 (45%)
Ank_2 172..270 CDD:289560 35/118 (30%)
ANK 196..321 CDD:238125 44/154 (29%)
ANK repeat 201..236 CDD:293786 12/37 (32%)
ANK 6 201..234 11/35 (31%)
2-5A binding (P-loop) 1 229..242 6/19 (32%)
ANK 7 238..268 8/43 (19%)
Ank_2 243..326 CDD:289560 29/91 (32%)
2-5A binding (P-loop) 2 253..275 5/21 (24%)
ANK repeat 272..326 CDD:293786 22/62 (35%)
ANK 8 272..301 14/37 (38%)
ANK 9 303..329 10/25 (40%)
PKc_like 375..587 CDD:304357 38/189 (20%)
Pkinase 387..586 CDD:278497 36/177 (20%)
RNase_RNase-L 590..708 CDD:199218
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..741
tnksXP_004911090.1 Ank_4 164..214 CDD:290365 23/50 (46%)
ANK 186..300 CDD:238125 36/113 (32%)
ANK repeat 196..224 CDD:293786 13/27 (48%)
Ank_2 198..290 CDD:289560 31/91 (34%)
ANK repeat 226..257 CDD:293786 10/30 (33%)
ANK repeat 259..290 CDD:293786 8/30 (27%)
Ank_4 317..367 CDD:290365 2/49 (4%)
ANK 339..453 CDD:238125 32/118 (27%)
ANK repeat 349..377 CDD:293786 2/27 (7%)
Ank_2 351..443 CDD:289560 29/96 (30%)
ANK repeat 379..410 CDD:293786 15/31 (48%)
ANK repeat 412..443 CDD:293786 10/33 (30%)
ANK repeat 501..533 CDD:293786 14/31 (45%)
Ank_2 504..598 CDD:289560 29/98 (30%)
ANK 530..716 CDD:238125 43/232 (19%)
ANK repeat 535..566 CDD:293786 11/35 (31%)
ANK repeat 568..598 CDD:293786 5/29 (17%)
ANK 655..780 CDD:238125 32/158 (20%)
ANK repeat 665..693 CDD:293786 9/43 (21%)
Ank_2 667..759 CDD:289560 21/120 (18%)
ANK repeat 695..726 CDD:293786 6/32 (19%)
ANK repeat 728..759 CDD:293786 4/30 (13%)
ANK repeat 781..811 CDD:293786
Ank_4 782..836 CDD:290365
ANK 808..932 CDD:238125
ANK repeat 815..846 CDD:293786
Ank_2 820..912 CDD:289560
ANK repeat 848..879 CDD:293786
ANK repeat 881..912 CDD:293786
SAM_tankyrase1,2 1003..1068 CDD:188923
SAM 1009..1066 CDD:197735
tankyrase_like 1070..1292 CDD:238718
PARP 1090..1287 CDD:279038
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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