DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RNASEL and ankrd34a

DIOPT Version :9

Sequence 1:NP_066956.1 Gene:RNASEL / 6041 HGNCID:10050 Length:741 Species:Homo sapiens
Sequence 2:XP_002938522.1 Gene:ankrd34a / 100494120 XenbaseID:XB-GENE-6035402 Length:541 Species:Xenopus tropicalis


Alignment Length:523 Identity:112/523 - (21%)
Similarity:184/523 - (35%) Gaps:180/523 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    29 LIKAVQNEDVDLVQQLLEGGANVNFQEEEG---GWTPLHNAVQMSRED------IVELLLRHGAD 84
            |:|||......|.:.||||||.:|    ||   |.|||..|.....:|      :|:.||.:|||
 Frog    14 LLKAVWQGKFRLTRLLLEGGAYIN----EGNAQGETPLMAACLAKYDDPQNKSRMVKYLLENGAD 74

Human    85 PVLRKKNGATPFILAA--IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR 147
            |.:..|.|.|..:.|.  :.|:. ::.:.|..|:|.:..|:                        
 Frog    75 PNMPDKMGKTALMHACCNVTGAA-VVSVLLEHGSDPSIKDY------------------------ 114

Human   148 GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS 212
                               .|.:|||.|..:|..|.|::|||       ||...|:..:|....:
 Frog   115 -------------------SGTSALMYAINRGDRETLRVLLD-------ACKARGKEVIIITTDT 153

Human   213 S-------------------DD----------SDVEAITHLL----LDHGADV---NVRGERGKT 241
            |                   ||          ||:|..|.|.    .:...||   |: |.|...
 Frog   154 SPSGTKKTKQYLNSPPSPGIDDKQSPGICMSPSDIEIKTSLSPASEKEEARDVFNFNM-GTRLTC 217

Human   242 PLILAVEKK---HLGLVQRLLEQEHIEINDTDSDGKTA-LLLA-----VELKLKKIAELLCKRGA 297
            |....:|.|   |:....|::.::.::..:::..|..| .:||     |..:...:.|  |:...
 Frog   218 PSSSKLEVKPPDHIVAKGRMVNKKQLKRLNSEPWGLVAPSVLAGSHPTVPTENTTVEE--CEETI 280

Human   298 STDCGDLVMTAR---------RNYDHSLVKVLLSHGAKEDFHPPAEDWKPQSSHWGAALKDLHRI 353
            :|:..:|.::.|         ...|.|.:|:        |...|.:|.....:.|...::..| :
 Frog   281 TTEVNNLSISNRPVLSRRHSIEGQDSSCLKL--------DEQSPGDDPSALDASWADKVQFSH-L 336

Human   354 YRPMIGKLKFFIDEKYKIADTSEGGIYLGFYEKQEVAVKTFCEGSPRAQREVSCLQSSRENSHLV 418
            ::|:..:            :|:.        |.||.:..|.........|.|:..:.:|     :
 Frog   337 HQPLSRR------------NTAP--------EAQETSNATLAPTIATNLRGVAHHKLTR-----M 376

Human   419 TFYGSESHRGHLFVCVTLCEQTLEACLDVHRGEDVENEEDEF-----------ARNVLSSIFKAV 472
            ..|.|:||         ||..::....|..|   |..|..::           :|..|.||..||
 Frog   377 DHYESDSH---------LCPDSIPGSPDSGR---VSLERRKYNASPLTLFTSSSRESLESIPSAV 429

Human   473 QEL 475
            ..:
 Frog   430 SPM 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNASELNP_066956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
ANK repeat 24..56 CDD:293786 12/26 (46%)
ANK 1 24..53 11/23 (48%)
Ank_2 29..122 CDD:289560 35/103 (34%)
ANK 2 58..87 14/37 (38%)
ANK 59..188 CDD:238125 30/136 (22%)
ANK repeat 59..89 CDD:293786 13/35 (37%)
ANK repeat 91..122 CDD:293786 7/32 (22%)
ANK 3 91..120 7/30 (23%)
Ank_2 96..199 CDD:289560 18/104 (17%)
ANK repeat 124..154 CDD:293786 0/29 (0%)
ANK 4 124..153 0/28 (0%)
ANK repeat 167..199 CDD:293786 12/31 (39%)
ANK 5 167..197 11/29 (38%)
Ank_2 172..270 CDD:289560 31/136 (23%)
ANK 196..321 CDD:238125 35/178 (20%)
ANK repeat 201..236 CDD:293786 13/70 (19%)
ANK 6 201..234 12/68 (18%)
2-5A binding (P-loop) 1 229..242 5/15 (33%)
ANK 7 238..268 6/32 (19%)
Ank_2 243..326 CDD:289560 17/100 (17%)
2-5A binding (P-loop) 2 253..275 2/21 (10%)
ANK repeat 272..326 CDD:293786 13/68 (19%)
ANK 8 272..301 8/34 (24%)
ANK 9 303..329 5/34 (15%)
PKc_like 375..587 CDD:304357 23/112 (21%)
Pkinase 387..586 CDD:278497 22/100 (22%)
RNase_RNase-L 590..708 CDD:199218
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..741
ankrd34aXP_002938522.1 ANK 12..136 CDD:238125 44/169 (26%)
ANK repeat 12..40 CDD:293786 13/29 (45%)
Ank_2 14..113 CDD:289560 35/103 (34%)
ANK repeat 42..79 CDD:293786 13/36 (36%)
ANK repeat 81..113 CDD:293786 7/32 (22%)
Ank_2 86..>145 CDD:289560 20/109 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.