DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RNASEL and epha7

DIOPT Version :9

Sequence 1:NP_066956.1 Gene:RNASEL / 6041 HGNCID:10050 Length:741 Species:Homo sapiens
Sequence 2:XP_031758138.1 Gene:epha7 / 100486526 XenbaseID:XB-GENE-488635 Length:1062 Species:Xenopus tropicalis


Alignment Length:339 Identity:72/339 - (21%)
Similarity:101/339 - (29%) Gaps:118/339 - (34%)


- Green bases have known domain annotations that are detailed below.


Human   381 LGFYEKQEVAVKTF-CEGSPRAQ----------------REVSCLQSSRENSHLVTFYGSESHRG 428
            :|:.|||.   :.| ||.|...|                :.|..:....||..|..|...:..:|
 Frog   689 VGYTEKQR---RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRQQQKKG 750

Human   429 H---------------------LFVCVTLCEQTLEACLDVHRGEDVENEEDEFARNVLSSIFKAV 472
            .                     .||.|    |||..     .|.:.:..:.:|....|..:.:.:
 Frog   751 KNCLEWFTSPPKSKRSGSTQTMPFVKV----QTLNT-----PGTNAQKLDGQFTVIQLVGMLRGI 806

Human   473 ---QELHLSCGYTHQDLQPQNILIDSKKAAHLADFDKSIKWAGDPQEVKRDLEDLGRLVLYVVKK 534
               .......||.|:||..:|||::|.....::||..|.....||..|            |....
 Frog   807 AAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRIIEDDPDAV------------YTTTG 859

Human   535 GSISFEDLKAQSNEEVVQLSPDEETKDLIHRLFHPGEHVRDCLSDLLGHPFFWT-----WESRYR 594
            |.|...    .:..|.:|           :|.|.....|             |:     ||....
 Frog   860 GKIPVR----WTAPEAIQ-----------YRKFTSASDV-------------WSYGIVMWEVMSY 896

Human   595 TLRNVGNESDIKTRKSESEILRLLQPGPSE-----HSKSFDKWTTKINECVMKKMNKFYEKRGNF 654
            ..|...:.|:....|:..|..||  |.|.:     |....|.|..:..|            |..|
 Frog   897 GERPYWDMSNQDVIKAIEEGYRL--PAPMDCPAGLHQLMLDCWQKERGE------------RPKF 947

Human   655 YQNTVGDLLKFIRN 668
            .| .||.|.|.|||
 Frog   948 EQ-IVGILDKMIRN 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNASELNP_066956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
ANK repeat 24..56 CDD:293786
ANK 1 24..53
Ank_2 29..122 CDD:289560
ANK 2 58..87
ANK 59..188 CDD:238125
ANK repeat 59..89 CDD:293786
ANK repeat 91..122 CDD:293786
ANK 3 91..120
Ank_2 96..199 CDD:289560
ANK repeat 124..154 CDD:293786
ANK 4 124..153
ANK repeat 167..199 CDD:293786
ANK 5 167..197
Ank_2 172..270 CDD:289560
ANK 196..321 CDD:238125
ANK repeat 201..236 CDD:293786
ANK 6 201..234
2-5A binding (P-loop) 1 229..242
ANK 7 238..268
Ank_2 243..326 CDD:289560
2-5A binding (P-loop) 2 253..275
ANK repeat 272..326 CDD:293786
ANK 8 272..301
ANK 9 303..329
PKc_like 375..587 CDD:304357 47/246 (19%)
Pkinase 387..586 CDD:278497 44/239 (18%)
RNase_RNase-L 590..708 CDD:199218 23/84 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..741
epha7XP_031758138.1 EphR_LBD_A7 29..205 CDD:198453
Ephrin_rec_like 274..311 CDD:400166
FN3 331..420 CDD:214495
FN3 468..559 CDD:238020
EphA2_TM 585..650 CDD:405290
PTKc_EphR_A 648..958 CDD:270651 69/335 (21%)
SAM_EPH-A7 983..1052 CDD:188947
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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