DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RNASEL and LOC100334396

DIOPT Version :9

Sequence 1:NP_066956.1 Gene:RNASEL / 6041 HGNCID:10050 Length:741 Species:Homo sapiens
Sequence 2:XP_021333736.1 Gene:LOC100334396 / 100334396 -ID:- Length:888 Species:Danio rerio


Alignment Length:892 Identity:200/892 - (22%)
Similarity:338/892 - (37%) Gaps:254/892 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    29 LIKAVQNEDVDLVQQLLEGGANVN--FQEEEGGW----TPLHNAVQMSREDIVELLLRHGADPVL 87
            |||.::....:.::::|. |.::|  :..||  |    |.|..||..::|:|...||...|||..
Zfish    16 LIKCIKENKQERLRKVLR-GRDINGLYPSEE--WNDDVTLLTAAVFWTKEEICTYLLGESADPNK 77

Human    88 RKKNGATPFILAAIAGSVKL--LKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGA- 149
            :..||.||...||....|.|  :|..|:..||.|......||....|...|:...:|.|.:.|| 
Zfish    78 QSTNGHTPLHYAAFTAGVPLSIVKRLLAAKADPNGHRLLIFTPLQCAVDNGREDIVKALIEAGAS 142

Human   150 -------NVNLRRKTK----------EDQERLRKGGATALMDAAEKGHVEV-------------- 183
                   |.::.:|.:          |:.:::.:..:| ..|...|...||              
Zfish   143 PERNHGKNPDVDKKVERMISEISSHNEEFKKVHQFFST-FCDILPKKPTEVHRIYKEHFLQEQPF 206

Human   184 ------------------------LKILLDEMGAD------VNACDNMGRNALIH---------- 208
                                    :|.|.|...||      :.....:.:...:|          
Zfish   207 MHINLFEMYFGPFGLGDEQYRQSAIKWLKDTKSADRYIEGAIKRFPKISQEYCVHLLTCLSFALC 271

Human   209 -------------------ALLSSDDSDVEAITHLLL---------------DHGADVNVRGERG 239
                               :|...:::..|.|.||:|               :|..     .|:.
Zfish   272 VSESVSPQVFSELVPILTNSLQPFENTQGELINHLVLKILNVMMQKTSEQRQNHSV-----YEKL 331

Human   240 KTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD-----------------GKTALLLAVELKLKK 287
            ...|:......:..|::.:.....:.:||...:                 .:|.:..|::.||:|
Zfish   332 SKSLLPLTHSNYSSLIRLMTYGLFVYLNDFAPELVALSGLSPVPETVLLKAETGMDEAMKKKLQK 396

Human   288 I------------AELLCKRGASTDCGDLVMTARRNYDHSLVKVLLSHGAKE----DFHPP---- 332
            :            .|.||:..|:      :.|.|:.......||....|::|    |...|    
Zfish   397 LDESLRHPVGSSAVESLCEETAA------LSTRRKKRRRKKKKVNQEAGSQETELQDKEQPYAVE 455

Human   333 -------------------AEDWKPQSSHWGAALK-----DLHRIYRPMIGKLKFFIDEKYKIAD 373
                               ...|...|..|...|:     |::.|:|  :..|...:|.::.||:
Zfish   456 ASIEESNSSVQPFIQSTVMPRKWHKISHRWRPKLEKLANMDINNIHR--LPSLTLVLDPEFLIAN 518

Human   374 TSEG-GIYLGFYEK-QEVAVKTFCEGSPRA-QREVSCLQ-SSRENSHLVTF--YGSESHRGHLFV 432
            .|:| .::||..:. .|||||...:.:.:. :.|...|: ...|:..:|.:  :..:.|.|:|  
Zfish   519 GSDGTQVFLGLRDDGTEVAVKRMVKFNYQVLKNEEEFLRLPELESQSIVRYVDFAEDDHFGYL-- 581

Human   433 CVTLCEQTLEACLDVHRGEDVENEEDEFARNVLSSIFKAVQELH-LSCGYTHQDLQPQNILIDSK 496
            .:.|||.|||..:..|..|| ::|.......::..:..::|.|| ......|:|::|||:|||.:
Zfish   582 VLQLCEYTLEEYIQDHLPED-KDERTLVLEKLVKEVLCSLQVLHDPQTKVLHRDIKPQNVLIDIQ 645

Human   497 KAAHLADFDKSIK-----------------WAGDPQEVKR---------DLEDLGRLVLYVVKKG 535
            ..|.||||..|.:                 |.......|:         |::..|.||.|::..|
Zfish   646 GKARLADFGISRRLKQGETTLQTSIAGTRCWKAKESINKKINTGYKRSSDIQVAGMLVYYILSGG 710

Human   536 SISF-EDLKAQSN----EEVVQLSPDEETKDLIHRLFHPGEHVRDCLSDLLGHPFFWTWESRYRT 595
            ...| ||:..:.|    ...::...|:..|||:..:.....:.|..:...|.||||||.|.:.|.
Zfish   711 HHPFGEDVDCEGNILRGRYSLEHLDDDLAKDLVEWMIDGNPNKRPTVEQSLAHPFFWTDERKVRY 775

Human   596 LRNVGNESDI-KTRKSESEILRLLQPGPSEHSKSFDKWTTKINECVMKKMNKFYEKRGNFYQNTV 659
            |:.:|:|::. |.||:..|::..:  ......|||.:|.:|....:::::.|   |||.:.:|.:
Zfish   776 LKILGSENEAEKNRKANKELIDAI--SKCTEGKSFAEWKSKFPSELVQELEK---KRGAYPENML 835

Human   660 GDLLKFIRNL-GEH-IDEEKHKKMKLKIGDPSLYFQKTFPDLVIYVY 704
            | ||:||||| |.| .|..|:..:.|            ||||.:.||
Zfish   836 G-LLRFIRNLYGHHKADAAKNSPLVL------------FPDLFVSVY 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNASELNP_066956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
ANK repeat 24..56 CDD:293786 6/28 (21%)
ANK 1 24..53 6/25 (24%)
Ank_2 29..122 CDD:289560 33/100 (33%)
ANK 2 58..87 12/32 (38%)
ANK 59..188 CDD:238125 42/190 (22%)
ANK repeat 59..89 CDD:293786 12/33 (36%)
ANK repeat 91..122 CDD:293786 13/32 (41%)
ANK 3 91..120 12/30 (40%)
Ank_2 96..199 CDD:289560 30/166 (18%)
ANK repeat 124..154 CDD:293786 9/37 (24%)
ANK 4 124..153 9/36 (25%)
ANK repeat 167..199 CDD:293786 10/75 (13%)
ANK 5 167..197 10/73 (14%)
Ank_2 172..270 CDD:289560 22/185 (12%)
ANK 196..321 CDD:238125 26/197 (13%)
ANK repeat 201..236 CDD:293786 8/78 (10%)
ANK 6 201..234 8/76 (11%)
2-5A binding (P-loop) 1 229..242 1/12 (8%)
ANK 7 238..268 2/29 (7%)
Ank_2 243..326 CDD:289560 18/111 (16%)
2-5A binding (P-loop) 2 253..275 3/38 (8%)
ANK repeat 272..326 CDD:293786 14/82 (17%)
ANK 8 272..301 9/57 (16%)
ANK 9 303..329 6/29 (21%)
PKc_like 375..587 CDD:304357 64/249 (26%)
Pkinase 387..586 CDD:278497 59/234 (25%)
RNase_RNase-L 590..708 CDD:199218 38/118 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..741
LOC100334396XP_021333736.1 ANK 47..151 CDD:238125 32/103 (31%)
ANK repeat 81..111 CDD:293786 12/29 (41%)
ANK repeat 112..145 CDD:293786 8/32 (25%)
PKc_like 508..767 CDD:328722 67/261 (26%)
RNase_Ire1_like 770..870 CDD:326562 38/118 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 118 1.000 Inparanoid score I12032
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0013115
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.960

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