DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mapk12 and rl

DIOPT Version :9

Sequence 1:NP_068514.1 Gene:Mapk12 / 60352 RGDID:70975 Length:367 Species:Rattus norvegicus
Sequence 2:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster


Alignment Length:341 Identity:152/341 - (44%)
Similarity:218/341 - (63%) Gaps:13/341 - (3%)


- Green bases have known domain annotations that are detailed below.


  Rat    21 WEVRAVYQDLQPVGSGAYGAVCSAVDSRTGNKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHEN 85
            :||...|..|..:|.||||.|.||.|:.|..:|||||: .||:.:.:.:|..||:.:|...:|||
  Fly    32 FEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKI-SPFEHQTYCQRTLREITILTRFKHEN 95

  Rat    86 VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHETLSEDRIQFLVYQMLKGLKYIHAAGVI 150
            :|.:.|:...| ::|...|.|:|...|.|||.||:|.:.||.|.|.:.:||:|:||||||:|.|:
  Fly    96 IIDIRDILRVD-SIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLKYIHSANVL 159

  Rat   151 HRDLKPGNLAVNEDCELKILDFGLARQADSE------MTGYVVTRWYRAPEVILNWMRYTQTVDI 209
            ||||||.||.:|:.|:|||.||||||.||.|      :|.||.||||||||::||...||:::||
  Fly   160 HRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 224

  Rat   210 WSVGCIMAEMITGKILFKGNDHLDQLKEIMKVTGTPPPEFVQKLQSAEAKNYMEGLPELEKKDFA 274
            ||||||:|||::.:.:|.|..:||||..|:.|.|:|..:.::.:.:.:|:||:|.||......:|
  Fly   225 WSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKPNVPWA 289

  Rat   275 SVLTNASPQAVNLLEKMLVLDAEQRVTAAEALAHPYFESLRDTEDEPKAQ---KYDDSFDDVDRT 336
            .:..||...|::||.|||..:..:|:...|||||||.|...|..|||.|:   :.:...||:.| 
  Fly   290 KLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVPFRINMENDDISR- 353

  Rat   337 LEEWKRVTYKEVLSFK 352
             :..|.:.::|.|.||
  Fly   354 -DALKSLIFEETLKFK 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mapk12NP_068514.1 STKc_p38gamma 11..353 CDD:143385 152/341 (45%)
TXY 183..185 1/1 (100%)
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 149/337 (44%)
S_TKc 38..326 CDD:214567 135/289 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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