DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RING1 and Su(z)2

DIOPT Version :10

Sequence 1:NP_002922.2 Gene:RING1 / 6015 HGNCID:10018 Length:406 Species:Homo sapiens
Sequence 2:NP_001260933.1 Gene:Su(z)2 / 36432 FlyBaseID:FBgn0265623 Length:1396 Species:Drosophila melanogaster


Alignment Length:115 Identity:31/115 - (26%)
Similarity:49/115 - (42%) Gaps:14/115 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    16 LSLYELHRTPQ-EAIMDGTEIAVSP-----RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIV 74
            :.|...|.|.: .|.||    |.||     |..|..:.|.:|...:.:..|...|.|.:|..||:
  Fly     1 MHLQNTHNTMESNAAMD----AASPASRDVRQFHDLITCRLCRGYMIDPTTVDYCYHTYCRSCIL 61

Human    75 TALRSGNKECPTCRK---KLVSKRSLRPDPNFDALISKIYPSREEYEAHQ 121
            ..|... ..||.|:.   |.:::.:|:.|....:||.|:.|...:.|..:
  Fly    62 KHLLRA-VYCPECKASGGKEINELNLKSDDTLRSLIYKLVPGLYQRECKE 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RING1NP_002922.2 Necessary for transcriptional repression. /evidence=ECO:0000250 30..234 27/100 (27%)
RING-HC_RING2 34..110 CDD:438398 22/83 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 148..263
Nuclear localization signal. /evidence=ECO:0000255 201..204
Necessary for interaction with CBX2. /evidence=ECO:0000250 230..406
RAWUL_RING1 261..400 CDD:340686
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..354
Su(z)2NP_001260933.1 RING-HC_PCGF5 23..117 CDD:438395 22/89 (25%)
RAWUL_PCGF2_like 137..228 CDD:340602
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.