DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTB and Arp6

DIOPT Version :10

Sequence 1:NP_001092.1 Gene:ACTB / 60 HGNCID:132 Length:375 Species:Homo sapiens
Sequence 2:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster


Alignment Length:398 Identity:105/398 - (26%)
Similarity:191/398 - (47%) Gaps:47/398 - (11%)


- Green bases have known domain annotations that are detailed below.


Human     6 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY- 69
            |.:|:|||:...|.|.|..|.|..| |:.:.:.:.:       ::.::||::....|....|.| 
  Fly     4 AVVVLDNGAHTAKVGLANQDEPHVV-PNCIMKAKSE-------RRRAFVGNQIDECRDTSALYYI 60

Human    70 -PIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 132
             ..:.|.:.||...:.:|.:.|..: :..:.|...:::||..:|.::.:|...:|:||.:....:
  Fly    61 LAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGV 125

Human   133 YVAIQAVLSLY-----ASGRTT-----GIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 187
            |....|.|:.:     :..|||     .|::|.|...||.||...|..:...|.|:|:.|:.||:
  Fly   126 YKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTN 190

Human   188 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK---SYELPD----- 244
            .|.::::.|  ......|..:|..|||.:|:||.||:|.|....|.....:   .|.|||     
  Fly   191 QLKELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVK 253

Human   245 ----------------GQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDL 293
                            .|::::.||||..||.||.||.:|::..||.|...:.:..|..:..::|
  Fly   254 RGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHREL 318

Human   294 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 358
            ..|.::.||:..:||...|:::::.||.|..:::.:|.|.:.....|.||..:|:...|::...:
  Fly   319 LLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYT 383

Human   359 KQEYDESG 366
            :.:|:|.|
  Fly   384 QDDYEEYG 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTBNP_001092.1 ASKHA_NBD_actin 6..370 CDD:466823 105/398 (26%)
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 103/395 (26%)

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