DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RGS3 and Axn

DIOPT Version :9

Sequence 1:NP_652759.4 Gene:RGS3 / 5998 HGNCID:9999 Length:1094 Species:Homo sapiens
Sequence 2:NP_733336.1 Gene:Axn / 43565 FlyBaseID:FBgn0026597 Length:745 Species:Drosophila melanogaster


Alignment Length:667 Identity:133/667 - (19%)
Similarity:199/667 - (29%) Gaps:237/667 - (35%)


- Green bases have known domain annotations that are detailed below.


Human   460 NPARTL--LLSE----ELLLYEGRNKAAEVTLFAYSDLLLF-------TKEDEPGRCDVLRNPLY 511
            |.||||  ||.:    ||.     .|..|....||:|.|.|       .::.:|.:...:...:|
  Fly    50 NWARTLNHLLEDRDGVELF-----KKYVEEEAPAYNDHLNFYFACEGLKQQTDPEKIKQIIGAIY 109

Human   512 LQSVKLQEGSSEDLKFCVLYLAEKAECLFTLEAHSQEQKKR------------VCWCLSENIAKQ 564
            ....|.|...|:||:..:..:....|  ..|..|..:..:|            ...|....|...
  Fly   110 RFLRKSQLSISDDLRAQIKAIKTNPE--IPLSPHIFDPMQRHVEVTIRDNIYPTFLCSEMYILYI 172

Human   565 QQLAASPPDSKMFETEADEKREMALEEG-KGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQ 628
            ||::|              ::|.....| .|.|:..|    ..|.|..|.....|||.  :.||:
  Fly   173 QQMSA--------------QQERCTSSGATGSGSAGS----SGSGGSSLAGACALPPT--TASGK 217

Human   629 EPAPSQEP----LSSKDSATSEGSPPGPDAPPSKDVPPCQEPPPAQDLSPCQDLPAGQE-PLPHQ 688
            :..|...|    ::...|:.| |.|.|..:.......|......:..:|....||.... |..|:
  Fly   218 QQLPQLVPPGAFINLPVSSVS-GPPAGTCSASGSVYGPSTSASSSGSISATDTLPRSSTLPTLHE 281

Human   689 DPLLTKDLPAIQESPTRDLPPCQDLPPSQVSLPAKALTEDTMSSG------------DLLAATGD 741
            |.:|:.               |.|....|:.....:|...::.:|            |||.||..
  Fly   282 DSVLSL---------------CDDFEKVQMQEGGGSLGSGSVGAGARAPDYPIRLTRDLLIATQK 331

Human   742 ------PPAAPRPAF--------VIPEVRLDSTYSQKAGAEQG------------CSGD------ 774
                  ||.|....:        .:|..|:|   |::|....|            ||.|      
  Fly   332 RRLEIRPPGAHGYVYNPSTTNTSYVPNSRVD---SERASVSSGGRTDSDTMSISSCSMDGRPYIQ 393

Human   775 ---------------------------------------------------------------EE 776
                                                                           ||
  Fly   394 RRHSSTESKAIRQSAMANKETNTFQVIPRTQRLHSNEHRPLKEEELVSLLIPKLEEVKRKRDLEE 458

Human   777 DAEE--------------------AEEVEEGEEGEEDEDEDTSDDNYGERSEAKRSSMIETGQGA 821
            .|.|                    ||.:.|....:||.|:|..|.:      ..|....:|...:
  Fly   459 RARERNPGAALLTNERSSASDRAFAEAIREKFALDEDNDQDILDQH------VSRVWKDQTPHRS 517

Human   822 EGGLSLRVQNSLRRR--THSEGSLLQEPRGPCFASDTTLHCSDGEGAASTWGMPSPSTLKKELGR 884
            .|.:|.......|||  ||..|          ..||..:..| |.....:..||..|:..::|..
  Fly   518 PGTMSPCPPIPSRRRTATHDSG----------MVSDGAMSLS-GHSMKHSKSMPDHSSCSRKLTN 571

Human   885 NGGSMH---HLSLFFTGHRKMSGADTVGDDDEASRKRKSKNLAK--DMKNKLGIFRRRNESPGAP 944
            ...||:   .:|:|        .||||....:||.:..|...:|  :.|.:|....||:.....|
  Fly   572 KWPSMNTDSGISMF--------SADTVTKYKDASSRSGSSTASKLEEAKRRLEDEPRRSRRYAQP 628

Human   945 PAGK-ADKMMKSFKPTS 960
            |... :.:.:.||..:|
  Fly   629 PMQHLSQQPLASFSSSS 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RGS3NP_652759.4 None
AxnNP_733336.1 RGS 55..170 CDD:295367 24/121 (20%)
Axin_b-cat_bind 494..543 CDD:285982 15/64 (23%)
DIX 665..739 CDD:279160
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3589
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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