| Sequence 1: | NP_002912.2 | Gene: | RGR / 5995 | HGNCID: | 9990 | Length: | 295 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001017877.1 | Gene: | rgra / 550575 | ZFINID: | ZDB-GENE-040924-6 | Length: | 295 | Species: | Danio rerio |
| Alignment Length: | 290 | Identity: | 164/290 - (56%) |
|---|---|---|---|
| Similarity: | 203/290 - (70%) | Gaps: | 4/290 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MAETSALPTGFGELEVLAVGMVLLVEALSGLSLNTLTIFSFCKTPELRTPCHLLVLSLALADSGI 65
Human 66 SLNALVAATSSLLRVSHRRWPYGSDGCQAHGFQGFVTALASICSSAAIAWGRYHHYCTRSQLAWN 130
Human 131 SAVSLVLFVWLSSAFWAALPLLGWGHYDYEPLGTCCTLDYSKGDRNFTSFLFTMSFFNFAMPLFI 195
Human 196 TITSYSLMEQKLGKSGHLQVNTTLPARTLLLGWGPYAILYLYAVIADVTSISPKLQMVPALIAKM 260
Human 261 VPTINAINYALGNEMVCRGIWQCLSPQKRE 290 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RGR | NP_002912.2 | 7tmA_Retinal_GPR | 17..281 | CDD:320200 | 150/263 (57%) |
| TM helix 1 | 18..44 | CDD:320200 | 11/25 (44%) | ||
| TM helix 2 | 51..77 | CDD:320200 | 16/25 (64%) | ||
| TM helix 3 | 92..122 | CDD:320200 | 22/29 (76%) | ||
| TM helix 4 | 130..150 | CDD:320200 | 13/19 (68%) | ||
| TM helix 5 | 177..206 | CDD:320200 | 9/28 (32%) | ||
| TM helix 6 | 208..238 | CDD:320200 | 12/29 (41%) | ||
| TM helix 7 | 248..273 | CDD:320200 | 12/24 (50%) | ||
| rgra | NP_001017877.1 | 7tm_1 | 34..265 | CDD:278431 | 135/234 (58%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C194330178 | |
| Domainoid | 1 | 1.000 | 244 | 1.000 | Domainoid score | I9963 |
| eggNOG | 1 | 0.900 | - | - | E33208_3BFRF | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H37709 | |
| Inparanoid | 1 | 1.050 | 346 | 1.000 | Inparanoid score | I8762 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG41606 | |
| OrthoDB | 1 | 1.010 | - | - | D291402at7742 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0010931 | |
| OrthoInspector | 1 | 1.000 | - | - | oto46551 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_118463 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR24240 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R10401 |
| SonicParanoid | 1 | 1.000 | - | - | X6901 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| ZFIN | 1 | 1.500 | - | - | ||
| 19 | 19.300 | |||||