| Sequence 1: | NP_002912.2 | Gene: | RGR / 5995 | HGNCID: | 9990 | Length: | 295 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001364737.1 | Gene: | sro-1 / 191958 | WormBaseID: | WBGene00005641 | Length: | 380 | Species: | Caenorhabditis elegans |
| Alignment Length: | 328 | Identity: | 64/328 - (19%) |
|---|---|---|---|
| Similarity: | 123/328 - (37%) | Gaps: | 80/328 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Human 23 LLVEALSGLSLNTLTIFSFC-----KTPELRTPCHLLVLS-LALADSGISLNALVAATSSLL-RV 80
Human 81 SHRRWPYGSDGCQAHGFQGFVTALASICSSAAIAWGRYHHYCTRSQLAW---NSAVSLVLFVWLS 142
Human 143 SAFWAALPLLGWGHYDYEPLGTCCTLDYSKGD------------RNFTSFLFTMSFFNFAMPLFI 195
Human 196 TIT-SYSLME----QKLGKSGHLQVNTTLPARTLLLGWGP---------------------YAIL 234
Human 235 YLYAVIADVTSISPKLQMVPALIAKMVPTINAINYALGNEMVCRGIWQCLSPQ---------KRE 290
Human 291 KDR 293 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RGR | NP_002912.2 | 7tmA_Retinal_GPR | 17..281 | CDD:320200 | 57/305 (19%) |
| TM helix 1 | 18..44 | CDD:320200 | 5/25 (20%) | ||
| TM helix 2 | 51..77 | CDD:320200 | 6/26 (23%) | ||
| TM helix 3 | 92..122 | CDD:320200 | 7/29 (24%) | ||
| TM helix 4 | 130..150 | CDD:320200 | 3/19 (16%) | ||
| TM helix 5 | 177..206 | CDD:320200 | 7/33 (21%) | ||
| TM helix 6 | 208..238 | CDD:320200 | 8/50 (16%) | ||
| TM helix 7 | 248..273 | CDD:320200 | 4/24 (17%) | ||
| sro-1 | NP_001364737.1 | 7tm_GPCRs | 10..300 | CDD:421689 | 60/312 (19%) |
| TM helix 1 | 10..32 | CDD:410628 | 5/21 (24%) | ||
| TM helix 3 | 81..111 | CDD:410628 | 7/29 (24%) | ||
| TM helix 4 | 122..142 | CDD:410628 | 3/19 (16%) | ||
| TM helix 5 | 169..211 | CDD:410628 | 7/41 (17%) | ||
| TM helix 6 | 234..264 | CDD:410628 | 4/29 (14%) | ||
| TM helix 7 | 274..297 | CDD:410628 | 5/34 (15%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 1 | 0.960 | |||||