DRSC/TRiP Functional Genomics Resources

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Protein Alignment RFC5 and cutlet

DIOPT Version :10

Sequence 1:NP_031396.1 Gene:RFC5 / 5985 HGNCID:9973 Length:340 Species:Homo sapiens
Sequence 2:NP_787969.1 Gene:cutlet / 44637 FlyBaseID:FBgn0015376 Length:993 Species:Drosophila melanogaster


Alignment Length:413 Identity:83/413 - (20%)
Similarity:138/413 - (33%) Gaps:159/413 - (38%)


- Green bases have known domain annotations that are detailed below.


Human    22 WVEKYRPQTLNDLIS----HQDILSTIQ------------------------------------- 45
            ||:||:|:...||:|    ::.:|..::                                     
  Fly   322 WVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKAFHSKREQEAVTGEGGTAGGAANQLNSF 386

Human    46 -----KF----------------INEDRLPH-----LLLYGPPGTGKTSTILACAKQLYKDKEFG 84
                 ||                .|.|.|..     .||.||||.|||:.....|:..      |
  Fly   387 NKRTGKFESNGGWRQRKSRQALNTNVDALGRPMQKVALLCGPPGLGKTTLAHTIARHA------G 445

Human    85 SMVLELNASDDRGIDIIRGPILSFASTRTIFK--KGFKLVILDEADAMTQDA------------- 134
            ..|.|:||||||..:..:..:.:.....::..  |....::|||.|...:.:             
  Fly   446 YNVREINASDDRSPEAFKLALENGTQMSSVLNEDKRPNCIVLDEIDGAPRQSIDYLVKFISDAVY 510

Human   135 -----------QNALRRVIEKFTENTRFCLICNYLSKIIPALQS-RCTRF--RFGPLTPELMVPR 185
                       .|.|:|.|        .| |||.:..  |||:. |...|  .|.|:....:..|
  Fly   511 TKVKAKGAKAEHNVLKRPI--------IC-ICNDVYD--PALRPLRQVAFVVTFPPIDAARLAER 564

Human   186 LEHVVEEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANI 250
            |..:..:|::......:.||...|..|:|..::.:|..|.....:|.:            |:.| 
  Fly   565 LVKIAFKEQLKTDFGSLIALAEKSGNDVRSCISSMQFFNAQKHSLTLQ------------DVLN- 616

Human   251 LDWMLNQDFTTAYRNITELKTLKGL-ALHDILTEI-------HLFVHRVDFPSSVRI---HLLTK 304
                         .|:.:....:|| |:.|.:..|       |...::||.|:.|.:   .:.|:
  Fly   617 -------------NNLGQKDRHQGLFAVWDAIFRIQRPRKTLHTDANKVDEPAQVTMTNTSVTTR 668

Human   305 MADI--------EY-RLSVGTNE 318
            :.::        :| ||:.|..|
  Fly   669 VRNVLEVVHSSGDYERLTQGVYE 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RFC5NP_031396.1 rfc 16..329 CDD:234763 83/413 (20%)
cutletNP_787969.1 PRK04195 416..>645 CDD:235250 58/271 (21%)

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