Sequence 1: | NP_001191676.1 | Gene: | RFC1 / 5981 | HGNCID: | 9969 | Length: | 1148 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014605.1 | Gene: | Gnf1 / 40607 | FlyBaseID: | FBgn0004913 | Length: | 1008 | Species: | Drosophila melanogaster |
Alignment Length: | 1038 | Identity: | 420/1038 - (40%) |
---|---|---|---|
Similarity: | 574/1038 - (55%) | Gaps: | 137/1038 - (13%) |
- Green bases have known domain annotations that are detailed below.
Human 185 KRKELSQNTDESGLNDEAIA----KQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKKARKDT 245
Human 246 EAGETFSSVQANLSKAEKHKYP-------------HKVKTAQVSDERKSYSPRK-------QSKY 290
Human 291 ESSKESQQHSKSSADKIGEVSSPKASSKLAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPK 355
Human 356 KTKSSPAK--KESV--SPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITG 416
Human 417 VLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRT 481
Human 482 MPG--KKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSRPTSKRDSLAKTIKK 544
Human 545 E-----------TDVFWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTI 598
Human 599 IGQQGDQSCAN----------------------KLLRWLRNWQKSSSEDKKHAAKFGKFSGKDDG 641
Human 642 SSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNG 706
Human 707 AASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLR 771
Human 772 FQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKAD 836
Human 837 SHRAKKDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDM 901
Human 902 KKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFPSWLGKH 966
Human 967 SSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQDVVALMDTYYLM 1031
Human 1032 KEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAIKASRHSTSPSLDSEY- 1095
Human 1096 NEELNEDD------SQSDEKDQDAIETDAMIKKK-----TKSSKPSKPEKDKEPRKGKGKSSK 1147 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RFC1 | NP_001191676.1 | Neuromodulin_N | <14..404 | CDD:331332 | 66/246 (27%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 46..201 | 4/15 (27%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 228..380 | 43/175 (25%) | |||
COG5275 | 272..502 | CDD:227600 | 90/242 (37%) | ||
LIGANc | <392..479 | CDD:332121 | 47/86 (55%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 496..538 | 15/41 (37%) | |||
RuvB_N | 584..>1003 | CDD:330522 | 227/440 (52%) | ||
RFC1 | 915..1067 | CDD:312129 | 67/151 (44%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1081..1148 | 22/79 (28%) | |||
Nuclear localization signal. /evidence=ECO:0000255 | 1120..1124 | 3/8 (38%) | |||
Gnf1 | NP_001014605.1 | COG5275 | <151..358 | CDD:227600 | 92/233 (39%) |
BRCT | 232..309 | CDD:278934 | 40/76 (53%) | ||
PRK04195 | 421..969 | CDD:235250 | 270/557 (48%) | ||
AAA | 506..633 | CDD:278434 | 91/127 (72%) | ||
RFC1 | 764..917 | CDD:285691 | 68/152 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165157758 | |
Domainoid | 1 | 1.000 | 155 | 1.000 | Domainoid score | I4237 |
eggNOG | 1 | 0.900 | - | - | E1_COG5275 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2187 | |
Inparanoid | 1 | 1.050 | 661 | 1.000 | Inparanoid score | I770 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG52880 | |
OrthoDB | 1 | 1.010 | - | - | D291910at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003699 | |
OrthoInspector | 1 | 1.000 | - | - | oto91616 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101059 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23389 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1087 |
SonicParanoid | 1 | 1.000 | - | - | X3601 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.800 |