DRSC/TRiP Functional Genomics Resources

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Protein Alignment RELA and Rel

DIOPT Version :10

Sequence 1:NP_001391586.1 Gene:RELA / 5970 HGNCID:9955 Length:562 Species:Homo sapiens
Sequence 2:NP_477094.1 Gene:Rel / 41087 FlyBaseID:FBgn0014018 Length:971 Species:Drosophila melanogaster


Alignment Length:396 Identity:125/396 - (31%)
Similarity:180/396 - (45%) Gaps:74/396 - (18%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDELFPLIFPA--EPAQASG---------------PYVEIIEQPKQRGMRFRYKCEGRSA-GSIP 47
            ||..:.:..||  .|:|..|               |.:.|:|||.:: .|||||.|.... ||:.
  Fly   115 MDHQYFVPAPATVPPSQNFGYHQNGLASDGDIKHVPQLRIVEQPVEK-FRFRYKSEMHGTHGSLN 178

Human    48 GERSTDTTKTHPTIKVWMSGPLYFGQINGYTGPGTVRISLVTKDPPHRPHPHEL-VGKDCRDGFY 111
            |..|..|.||.|.:           .:..|.||..:|.||...: ...||.|:| |.||.||   
  Fly   179 GANSKRTPKTFPEV-----------TLCNYDGPAVIRCSLFQTN-LDSPHSHQLVVRKDDRD--- 228

Human   112 EAELCPDRCIH---------SFQNLGI-----------QCVKKRDLEQAISQRIQTNNNPFQ--- 153
               :|....:|         .|.|:||           .|.||:|.......|.:.::...|   
  Fly   229 ---VCDPHDLHVSKERGYVAQFINMGIIHTAKKYIFEELCKKKQDRLVFQMNRRELSHKQLQELH 290

Human   154 VPIEEQRGDYDLNAVRLCFQVTVRDPSGR--PLRLPPVLSHPIFDNRAPNTAELKICRVNRNSGS 216
            ...|.:..|.:||.|||||:....:.:|.  || .|||.|:.|.:.::..|.||:|.|:::.:|.
  Fly   291 QETEREAKDMNLNQVRLCFEAFKIEDNGAWVPL-APPVYSNAINNRKSAQTGELRIVRLSKPTGG 354

Human   217 CLGGDEIFLLCDKVQKEDIEVYFTGPG------WEARGSFSQADVHRQVAIVFRTPPYADPSLQA 275
            .:|.||:.||.:||.|::|:|.|....      |||...|.::|||.|.|||.:||||.|..:..
  Fly   355 VMGNDELILLVEKVSKKNIKVRFFEEDEDGETVWEAYAKFRESDVHHQYAIVCQTPPYKDKDVDR 419

Human   276 PVRVSMQLRRPSDRELSEP-MEFQYLPDTDDRHRIEEKRKRTYETFKSIMKKSPFSGPTDPRPPP 339
            .|.|.::|.||||.|.|.| :.|:|.|.:   ..:..||:||..:..|....:..|..:...|..
  Fly   420 EVNVYIELIRPSDDERSFPALPFRYKPRS---VIVSRKRRRTGSSANSSSSGTESSNNSLDLPKT 481

Human   340 RRIAVP 345
            ..:|.|
  Fly   482 LGLAQP 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RELANP_001391586.1 RHD-n_RelA 19..198 CDD:143645 63/205 (31%)
IPT_NFkappaB 205..301 CDD:238582 43/102 (42%)
Nuclear localization signal. /evidence=ECO:0000255 312..315 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 320..359 5/26 (19%)
Transcriptional activation domain 3. /evidence=ECO:0000250|UniProtKB:Q04207 353..400
Transcriptional activation domain 1. /evidence=ECO:0000269|PubMed:1732726 426..487
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 517..541
Transcriptional activation domain 2. /evidence=ECO:0000250|UniProtKB:Q04207 531..562
9aaTAD. /evidence=ECO:0000255 547..555
RelNP_477094.1 RHD-n_Relish 150..336 CDD:143644 63/205 (31%)
IPT_NFkappaB 343..446 CDD:238582 43/102 (42%)
ANKYR 590..805 CDD:440430
ANK repeat 640..671 CDD:293786
ANK repeat 673..708 CDD:293786
Blue background indicates that the domain is not in the aligned region.

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