DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atp8b1 and Atp8b1

DIOPT Version :9

Sequence 1:NP_001025562.1 Gene:atp8b1 / 594952 XenbaseID:XB-GENE-490143 Length:1250 Species:Xenopus tropicalis
Sequence 2:NP_001099610.1 Gene:Atp8b1 / 291555 RGDID:1308488 Length:1259 Species:Rattus norvegicus


Alignment Length:1254 Identity:944/1254 - (75%)
Similarity:1068/1254 - (85%) Gaps:18/1254 - (1%)


- Green bases have known domain annotations that are detailed below.


 Frog     2 DTDYESTYEDDSQVPNDDVVPYSDDETDDEL-DSPQTDEPEQNRRNVQAEQSREPVIKECTWQVK 65
            :.|.|:|:::||| |||:|||||||||:||| |.....||||||.|.:.|:.:|...|:||||||
  Rat     4 ERDSETTFDEDSQ-PNDEVVPYSDDETEDELEDQGPAVEPEQNRVNREVEKKKETFRKDCTWQVK 67

 Frog    66 ANDRNFYDQPEFKKKVFLCLKKSKYAGNAIKTYKYNPITFLPVNLYEQFKRAANAYFLVLLILQT 130
            ||||.|::||.|....|.|:|:||||.|||||||||.:||||:||:||||||||.|||:|||||.
  Rat    68 ANDRKFHEQPHFMNTKFFCIKESKYASNAIKTYKYNALTFLPMNLFEQFKRAANFYFLILLILQA 132

 Frog   131 IPQISTVTWSTTLIPLLLVLGITAIKDLVDDIARHKMDNEINNRPSEVITDGRFKKTKWKHIHVG 195
            ||||||:.|.|||:|||||||||||||||||:||||||.|||||..|||.|||||..|||.|.||
  Rat   133 IPQISTLAWYTTLVPLLLVLGITAIKDLVDDVARHKMDKEINNRTCEVIKDGRFKIIKWKDIQVG 197

 Frog   196 DIIRINKNEFVPADVLLLSSSDPNSLCYVETAELDGETNLKFKMSLEITDKLLQKEEQLAGFDGL 260
            |:||:.||:|:|||:||||||:||||||||||||||||||||||:|||||:.||.|:.||.|||.
  Rat   198 DVIRLKKNDFIPADILLLSSSEPNSLCYVETAELDGETNLKFKMALEITDQYLQIEDNLATFDGF 262

 Frog   261 VECEEPNNRLDKFVGTLFWRGNSFGLDADKILLRGCTVRNTEYCHGLVLFAGADTKIMRNSGKTR 325
            :||||||||||||.||||||..||.|||||||||||.:|||:.|||||:|||||||||:||||||
  Rat   263 IECEEPNNRLDKFTGTLFWRNQSFPLDADKILLRGCVIRNTDVCHGLVIFAGADTKIMKNSGKTR 327

 Frog   326 LKRTKIDYLMNYMVYTIFVLLILAAAGLAIGQTFWEAKLGAANVSWYLYDGNNYSPSYRGFLAFW 390
            .||||||||||||||||.::|||.:||||||..:|||::|  |.|||||||.|.:|||||||.||
  Rat   328 FKRTKIDYLMNYMVYTIIIVLILVSAGLAIGHAYWEAQIG--NYSWYLYDGENATPSYRGFLNFW 390

 Frog   391 GYIIVLNTMVPISLYVSVEVIRLGQSYFINWDLQMYFSPKDTPAKARTTTLNEQLGQIQYIFSDK 455
            ||||||||||||||||||||||||||:|||||||||::.||||||:||||||||||||.||||||
  Rat   391 GYIIVLNTMVPISLYVSVEVIRLGQSHFINWDLQMYYAEKDTPAKSRTTTLNEQLGQIHYIFSDK 455

 Frog   456 TGTLTQNIMTFKKCTINGTTYGDDDDELKSGQTK--QVDFSWNPLADPSFTFHDNYLIEQIRAGK 518
            ||||||||||||||.||||.|||..|..:...:|  .||||||..||....|:|:||||||::||
  Rat   456 TGTLTQNIMTFKKCCINGTIYGDHRDASQHSHSKIELVDFSWNEFADGKLAFYDHYLIEQIQSGK 520

 Frog   519 DKDVYEFFKLLALCHTVMAEKTDGELIYQAASPDEGALVTAARNFGFVFLSRTQSTITISELGQE 583
            :.:|.:||.||::|||||.::.||::.||||||||||||.|||||||.||:|||:|||:||||.|
  Rat   521 EPEVRQFFFLLSICHTVMVDRIDGQINYQAASPDEGALVNAARNFGFAFLARTQNTITVSELGTE 585

 Frog   584 KTYEVLAILDFNSDRKRMSIIVRQPDGRIRLYCKGADTVIYERLHPDNPIKDQTQKALDIFANAS 648
            :||.|||||||||||||||||||.|:|.|||||||||||||||||..||:|.:||.||||||:.:
  Rat   586 RTYSVLAILDFNSDRKRMSIIVRTPEGSIRLYCKGADTVIYERLHRMNPMKQETQDALDIFASET 650

 Frog   649 LRTLCLCYKDINKGDFENWSKKYKQASVATSNRDEALDRVYEAIETDLKLLGATAIEDKLQDDVS 713
            |||||||||:|.:.:|..|:||:..||||:||||||||:|||.||.||.|||||||||||||.|.
  Rat   651 LRTLCLCYKEIEEKEFAEWNKKFMAASVASSNRDEALDKVYEEIERDLILLGATAIEDKLQDGVP 715

 Frog   714 GTIFNLARADIKIWVLTGDKKETAENIGYSCKLLDDDTEILYGEDINVHLQTRMENQRNQMSGNQ 778
            .||..||:||||||||||||||||||||::|:||.:||.|.||||||..|.||||||||:  |..
  Rat   716 ETISKLAKADIKIWVLTGDKKETAENIGFACELLTEDTTICYGEDINSLLHTRMENQRNR--GGV 778

 Frog   779 GAQSNQSG--AFLPTDKKHALIITGSWLNEILLEKKKRKKKRLKLKFPRTKEEKEQQLHEKLKAY 841
            .|:.....  .|.|..:..|||||||||||||||||.::.|.||||||||:||:..:...:.:..
  Rat   779 SAKFAPPAYEPFFPPGENRALIITGSWLNEILLEKKTKRSKILKLKFPRTEEERRMRSQSRRRLE 843

 Frog   842 ALKEQRQRSFVDLACECSAVICCRVTPKQKAMVVDLVKRYKKAVTLAIGDGANDVNMIKTAHIGV 906
            ..|||||::||||||||||||||||||||||||||||||||||:|||||||||||||||||||||
  Rat   844 EKKEQRQKNFVDLACECSAVICCRVTPKQKAMVVDLVKRYKKAITLAIGDGANDVNMIKTAHIGV 908

 Frog   907 GISGQEGMQAVMSSDYSFAQFRYLQRLLLVHGRWSYIRMCKFLRYFFYKNFSFTLVHFWYSFFNG 971
            |||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||
  Rat   909 GISGQEGMQAVMSSDYSFAQFRYLQRLLLVHGRWSYIRMCKFLRYFFYKNFAFTLVHFWYSFFNG 973

 Frog   972 FSAQTVYEDWFITLYNVLYSSLPVLLVGLLDQDVSDKLSLAFPRLYVPGQKDLLFNYKKFFLSLF 1036
            :||||.||||||||||||||||||||:|||||||||||||.||.|||.||:||||||||||:||.
  Rat   974 YSAQTAYEDWFITLYNVLYSSLPVLLMGLLDQDVSDKLSLRFPGLYVVGQRDLLFNYKKFFVSLL 1038

 Frog  1037 HGIVTSLIIFFIPYGAFLLTMGQDGEAPSDYQSFAVTTATALVITVNFQIGLDTSYWTFVNAFSI 1101
            ||::||:::||||:||:|.|:||||||||||||||||.|:|||||||||||||||||||||||||
  Rat  1039 HGVLTSMVLFFIPFGAYLQTVGQDGEAPSDYQSFAVTMASALVITVNFQIGLDTSYWTFVNAFSI 1103

 Frog  1102 FGSIAIYFGIMFDLHSAGIHVLFPSMFIFTG--------AAPNALRQPYLWLTIILTVAFCLLPI 1158
            |||||:|||||||.|||||||||||.|.|||        .|.|||||||:|||||||||.||||:
  Rat  1104 FGSIALYFGIMFDFHSAGIHVLFPSAFQFTGWCFSDSESTASNALRQPYIWLTIILTVAVCLLPV 1168

 Frog  1159 VALRFLAKTIWPSESDKIQKKGKKFKAEVEQRAKPKPFARGVSTRRSAYAFSHQRGYADLISSGR 1223
            ||:|||:.||||||||||||..|:.|||.:.:.:...|.||.|:|||||||||||||||||||||
  Rat  1169 VAIRFLSMTIWPSESDKIQKHRKRLKAEEQWKRRQSVFRRGASSRRSAYAFSHQRGYADLISSGR 1233

 Frog  1224 SIRKKRASLDAVFDNYPAQ 1242
            ||||||:.|||:..:..|:
  Rat  1234 SIRKKRSPLDAIIADGTAE 1252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atp8b1NP_001025562.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 30/50 (60%)
P-type_ATPase_APLT_Dnf-like 92..1049 CDD:319770 739/960 (77%)
Atp8b1NP_001099610.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 29/48 (60%)
PhoLip_ATPase_N 86..142 CDD:292826 43/55 (78%)
ATPase-Plipid 92..1187 CDD:273734 851/1098 (78%)
E1-E2_ATPase 171..>234 CDD:278548 47/62 (76%)
Cation_ATPase 534..628 CDD:289987 75/93 (81%)
HAD_like <875..919 CDD:304363 42/43 (98%)
PhoLip_ATPase_C 919..1181 CDD:292829 220/261 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 469 1.000 Domainoid score I3973
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21151
Inparanoid 1 1.050 1908 1.000 Inparanoid score I668
OMA 1 1.010 - - QHG53737
OrthoDB 1 1.010 - - D30721at32523
OrthoFinder 1 1.000 - - FOG0000076
OrthoInspector 1 1.000 - - oto204802
Panther 1 1.100 - - LDO PTHR24092
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X168
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.080

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