DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atp8b1 and SPAC24B11.12c

DIOPT Version :9

Sequence 1:NP_001025562.1 Gene:atp8b1 / 594952 XenbaseID:XB-GENE-490143 Length:1250 Species:Xenopus tropicalis
Sequence 2:NP_592849.1 Gene:SPAC24B11.12c / 2541560 PomBaseID:SPAC24B11.12c Length:1402 Species:Schizosaccharomyces pombe


Alignment Length:1360 Identity:447/1360 - (32%)
Similarity:670/1360 - (49%) Gaps:253/1360 - (18%)


- Green bases have known domain annotations that are detailed below.


 Frog     6 ESTYEDDSQ---VPNDDVVPYSDDETDDELDSPQTDE-----PEQNRRNVQAEQSREPVIKECTW 62
            ||..|...|   :||...:........|.|:.|..|.     .|.:..:.|:.:..:.:.:...:
pombe     2 ESVEEKSKQRRWLPNFKALRLKVYRLADRLNIPLADAARVELEEYDGSDPQSLRGLQKLPRTLYF 66

 Frog    63 QVKANDRNFYDQPEFKKKVFLCLKKSKYAGNAIKTYKYNPITFLPVNLYEQFKRAANAYFLVLLI 127
            .:...|....|..|.|:         .:..|.|:|.||.||.|:|.|::.||:..||.:||.|:|
pombe    67 GLPLPDSELDDTGEAKR---------WFPRNKIRTAKYTPIDFIPKNIFLQFQNVANLFFLFLVI 122

 Frog   128 LQTIPQI-STVTWSTTLIPLLLVLGITAIKDLVDDIARHKMDNEINNRP-------------SEV 178
            ||:|... ..|......:||::|:||||:||.::|..|..:|..:||.|             :|.
pombe   123 LQSISIFGEQVNPGLAAVPLIVVVGITAVKDAIEDFRRTMLDIHLNNTPTLRLSHYQNPNIRTEY 187

 Frog   179 IT--------------------------------------------------------------- 180
            |:                                                               
pombe   188 ISYFRRFKKRISALFRVFLAKQEEKKRAKRLNDAVPLEDMAGSESRPSYDSIFRESFEAKRSFED 252

 Frog   181 ----------DG-----------------------RFKKTKWKHIHVGDIIRINKNEFVPADVLL 212
                      ||                       .||||.||.:.|||.:::..|:.:|||:::
pombe   253 SKGKVPLSALDGTATILQSRPMDIIDYEAEATGECHFKKTYWKDVRVGDFVKVMDNDEIPADIVI 317

 Frog   213 LSSSDPNSLCYVETAELDGETNLKFKMSLEITDKLLQKEE-QLAGFDGLVECEEPNNRLDKFVGT 276
            ::||||..:||:||..||||||||.:.:|.....::.:.. :...|  .:|.|.|:..|.::.|.
pombe   318 INSSDPEGICYIETKNLDGETNLKMRHALTCGKNVVDEASCERCRF--WIESEPPHANLYEYNGA 380

 Frog   277 L--FWRGNSFGLDA----------DKILLRGCTVRNTEYCHGLVLFAGADTKIMRNSGKTRLKRT 329
            .  |....:.|.|.          |.:|||||.:|||::..|:|:|.|.|||||.|||...|||:
pombe   381 CKSFVHSEAGGSDTSQTVSEPISLDSMLLRGCVLRNTKWVIGVVVFTGDDTKIMLNSGAPPLKRS 445

 Frog   330 KIDYLMNYMVYTIFVLLI------LAAAGLAIGQTFWEAKLGAANVSWYLYDGN-NYSPSYRGFL 387
            :|...:|:.||..|::|.      ....|:|     |.   |.:..|:|...|: ..||:..|.:
pombe   446 RITRNLNWNVYLNFIILFSMCFVCAVVEGIA-----WR---GHSRSSYYFEFGSIGGSPAKDGVV 502

 Frog   388 AFWGYIIVLNTMVPISLYVSVEVIRLGQSYFINWDLQMYFSPKDTPAKARTTTLNEQLGQIQYIF 452
            .|:..:|:...:||||||:|:|:::..|:.||.:|..||:.........::..:::.|||::|||
pombe   503 TFFTGVILFQNLVPISLYISIEIVKTIQAIFIYFDKDMYYKKLKYACTPKSWNISDDLGQVEYIF 567

 Frog   453 SDKTGTLTQNIMTFKKCTINGTTYGDDDDELKSGQTKQ--VDFSWNPLADPSF------------ 503
            ||||||||||:|.||||||||..||:...|..:|..|:  .|.....|...||            
pombe   568 SDKTGTLTQNVMEFKKCTINGVAYGEAFTEAMAGMAKREGKDTEELTLQKQSFIERDRMQMISQM 632

 Frog   504 -TFHDN-YLIEQI--------------RAGKDKDV--YEFFKLLALCHTVMAEKTDGELIYQAAS 550
             ..||| ||::..              :||:::.:  ||||..|||||:|:|::....::|:|.|
pombe   633 RNMHDNKYLVDDNLTFISSQFVHDLAGKAGEEQSLACYEFFLALALCHSVVADRVGDRIVYKAQS 697

 Frog   551 PDEGALVTAARNFGFVFLSRTQSTITISELGQEKTYEVLAILDFNSDRKRMSIIVRQPDGRIRLY 615
            |||.|||..||:.|||||.:.:..:....||:.:.::::..::|:|.|||||:||:.||.|..|.
pombe   698 PDEAALVGTARDVGFVFLDQRRDIMVTRALGETQRFKLMDTIEFSSARKRMSVIVKGPDNRYVLI 762

 Frog   616 CKGADTVIYERLHPDNPI--KDQTQKALDIFANASLRTLCLCYKDINKGDFENWSKKYKQASVAT 678
            |||||::|:|||.|:..:  :..|.:.|.|||...|||||:..:::.:.::..|.:||..|:.|.
pombe   763 CKGADSIIFERLEPNEQVELRKTTSEHLRIFALEGLRTLCIAKRELTEEEYYEWKEKYDIAASAI 827

 Frog   679 SNRDEALDRVYEAIETDLKLLGATAIEDKLQDDVSGTIFNLARADIKIWVLTGDKKETAENIGYS 743
            .||:|.::.|.:.||:.|.|||.|||||:||:.|..:|..||:|.||:|||||||.|||.|||:|
pombe   828 ENREEQIEEVADLIESHLTLLGGTAIEDRLQEGVPDSIALLAQAGIKLWVLTGDKMETAINIGFS 892

 Frog   744 CKLLDDDTEIL-YGEDINV---HLQTRMENQRNQMSGNQGAQSNQSGAFLPTDK---KHALIITG 801
            |.|||...::: :..|..|   .|:..:.:...:..|..|:......|....|.   .|||:|.|
pombe   893 CNLLDAGMDMIKFDVDQEVSTPELEVILADYLYRYFGLSGSVEELEAAKKDHDTPSGSHALVIDG 957

 Frog   802 SWLNEILLEKKKRKKKRLKLKFP-RTKEEKEQQLHEKLKAYALKEQRQRSFVDLACECSAVICCR 865
            |.|..:             |..| |||                       |:.|...|.||:|||
pombe   958 SVLKRV-------------LDGPMRTK-----------------------FLLLCKRCKAVLCCR 986

 Frog   866 VTPKQKAMVVDLVKRYKKAVTLAIGDGANDVNMIKTAHIGVGISGQEGMQAVMSSDYSFAQFRYL 930
            |:|.|||.||.||:...:.:|||||||||||.||:.|.|||||.|:||..|.||:||:..|||:|
pombe   987 VSPAQKADVVQLVRESLEVMTLAIGDGANDVAMIQKADIGVGIVGEEGRAAAMSADYAIGQFRFL 1051

 Frog   931 QRLLLVHGRWSYIRMCKFLRYFFYKNFSFTLVHFWYSFFNGFSAQTVYEDWFITLYNVLYSSLPV 995
            .:|:||||||.|.|:.:.:..||||:..:|...|||..:|.|.|..:::..::.|:|:::|||||
pombe  1052 SKLVLVHGRWDYNRVAEMVNNFFYKSVVWTFTLFWYQIYNNFDANYLFDYTYVMLFNLIFSSLPV 1116

 Frog   996 LLVGLLDQDVSDKLSLAFPRLYVPGQKDLLFNYKKFFLSLFHGIVTSLIIFFIPYGAFLL----- 1055
            :::|:.||||:..|||..|:||..|...|....|.|...:..|...|:|.||.   :||:     
pombe  1117 IVMGVYDQDVNADLSLRIPQLYKRGILQLNSARKIFIGYMLDGFYQSVICFFF---SFLVINNVT 1178

 Frog  1056 TMGQDGEAPSDYQSFAVTTATALVITVNFQIGLDTSYWTFVNAFSI--FGSIAIYFGIMFDLHSA 1118
            |..|:|......|...|..|...::.|:..:.|:.|.|   :.|||  :....:.|.....::|.
pombe  1179 TAAQNGRDTMAVQDLGVYVAAPTIMVVDTYVILNQSNW---DVFSIGLWALSCLTFWFWTGVYSQ 1240

 Frog  1119 GIHVLFPSMFIFTGAAPNALRQPYLWLTIILTVAFCLLPIVALRFLAKTIWPSESDKIQK 1178
            .::.     :.|..:|....|.|..|..:..|:..||.|........|..||.:.|.|::
pombe  1241 SLYT-----YEFYKSASRIFRTPNFWAVLCGTIVSCLFPKFLFMTTQKLFWPYDVDIIRE 1295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atp8b1NP_001025562.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 12/53 (23%)
P-type_ATPase_APLT_Dnf-like 92..1049 CDD:319770 400/1128 (35%)
SPAC24B11.12cNP_592849.1 ATPase-Plipid 85..1295 CDD:273734 431/1266 (34%)
PhoLip_ATPase_N <85..129 CDD:292826 21/43 (49%)
Cation_ATPase 678..773 CDD:289987 42/94 (45%)
COG4087 <989..1045 CDD:226572 35/55 (64%)
PhoLip_ATPase_C 1038..1287 CDD:292829 82/259 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 1.000 Domainoid score I2289
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000076
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24092
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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