DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atp8b1 and SPBC887.12

DIOPT Version :9

Sequence 1:NP_001025562.1 Gene:atp8b1 / 594952 XenbaseID:XB-GENE-490143 Length:1250 Species:Xenopus tropicalis
Sequence 2:NP_596486.1 Gene:SPBC887.12 / 2541239 PomBaseID:SPBC887.12 Length:1258 Species:Schizosaccharomyces pombe


Alignment Length:1322 Identity:481/1322 - (36%)
Similarity:701/1322 - (53%) Gaps:187/1322 - (14%)


- Green bases have known domain annotations that are detailed below.


 Frog    24 SDDETDDE----------LDSPQTDEPE----------------QNRRNVQAEQSR---EPVIKE 59
            |.||.:||          ||:|...|.|                ||..|.....:|   .|:..|
pombe    15 SRDEDEDEFAGESMVGRTLDNPFLGEDEFEDIFGSESQYISSSGQNSTNPFLADTRIENSPLGSE 79

 Frog    60 CTWQVKAND---------------RNFYD--QPE---------FK---KKVFLCLKKSK------ 89
            .    |||.               |:|.|  |||         |.   ||:....||.|      
pombe    80 S----KANQLNKQGTNVNHIEIPLRDFNDPTQPESFLPPPKNTFTSRIKKIKNLFKKEKKQVKPE 140

 Frog    90 ----------------YAGNAIKTYKYNPITFLPVNLYEQFKRAANAYFLVLLILQTIPQISTVT 138
                            :..||:.|.||:..||||..|.|||.:.||.:||...::|.||.|:.|.
pombe   141 DLGPRQIILNDYSANHFLHNAVSTCKYSAFTFLPKFLKEQFSKYANLFFLFTAVVQQIPGITPVN 205

 Frog   139 WSTTLIPLLLVLGITAIKDLVDDIARHKMDNEINNRPSEVITDGRFKKTKWKHIHVGDIIRINKN 203
            ..||:.|:|:||.::.||::::||.|.|.|.|:|..|..|:....|.:.:||.:.||||::|...
pombe   206 RYTTIGPMLIVLSVSGIKEIMEDIKRKKQDQELNESPCYVLQGTGFVEKQWKDVVVGDIVKIVSE 270

 Frog   204 EFVPADVLLLSSSDPNSLCYVETAELDGETNLKFKMSLEITDKLLQKEEQLAGFDGLVECEEPNN 268
            .|.|||::|||||:|..|||:|||.||||||||.|.:|..|..|| |..:|....|.|:.|:|||
pombe   271 TFFPADLVLLSSSEPEGLCYIETANLDGETNLKIKQALPETAGLL-KPVELGQLSGEVKSEQPNN 334

 Frog   269 RLDKFVGT--LFWRGNSFGLDADKILLRGCTVRNTEYCHGLVLFAGADTKIMRNSGKTRLKRTKI 331
            .|..|..|  |........|..|::||||..:|||.:.:|:|:|.|.::|:|:|:.:|.:|||.:
pombe   335 NLYTFDATLKLLPSDRELPLSPDQLLLRGAQLRNTPWVYGIVVFTGHESKLMKNTTETPIKRTSV 399

 Frog   332 DYLMNYMVYTIFVLLILAAAGLAIGQTFWEAKLGAANVSWYLYDGNNYSPSYRGFLAFWGYIIVL 396
            :..:|..:..:..:.:......::|.....:..|:| :|:..|..|.....::|.|.||   |:.
pombe   400 EKQVNSQILFLLCIFVFLCFASSLGALIHRSVYGSA-LSYVKYTSNRAGMFFKGLLTFW---ILY 460

 Frog   397 NTMVPISLYVSVEVIRLGQSYFINWDLQMYFSPKDTPAKARTTTLNEQLGQIQYIFSDKTGTLTQ 461
            :.:|||||:|:.|::|..|:..|:.||.||....||||..||::|.|:|||:.|||||||||||:
pombe   461 SNLVPISLFVTFELVRYIQAQLISSDLDMYNEETDTPAACRTSSLVEELGQVGYIFSDKTGTLTR 525

 Frog   462 NIMTFKKCTINGTTYGDDDDELKSGQTKQVDFSWNPLADPSFTFHDNYLIEQIRAGKDKD-VYEF 525
            |.|.|::|||.|..|.|...|.:       .|:...|....:.:..:.|.|.::..::.. :::|
pombe   526 NQMEFRQCTIAGVAYADVIPEDR-------QFTSEDLDSDMYIYDFDTLKENLKHSENASLIHQF 583

 Frog   526 FKLLALCHTVMAE--KTDGELIYQAASPDEGALVTAARNFGFVFLSRTQSTITISELGQEKTYEV 588
            ..:|::||||:.|  ::...:.|||:||||||||..|.:.|:.||:|....:|:|..|::::||:
pombe   584 LLVLSICHTVIPEYDESTNSIKYQASSPDEGALVKGAASIGYKFLARKPHLVTVSIFGKDESYEL 648

 Frog   589 LAILDFNSDRKRMSIIVRQPDGRIRLYCKGADTVIYERLHPDNPIKDQTQKALDIFANASLRTLC 653
            |.|.:|||.||||||:.|.|||:||||.|||||||.|||..|||....|...|:.:|...|||||
pombe   649 LHICEFNSTRKRMSIVFRCPDGKIRLYVKGADTVIMERLASDNPYLQTTIHHLEDYATVGLRTLC 713

 Frog   654 LCYKDINKGDFENWSKKYKQASVATSNRDEALDRVYEAIETDLKLLGATAIEDKLQDDVSGTIFN 718
            :..:::.:.:::.||..::.|:.:..:|.:.|....|.||.||.|||||||||:|||.|..||..
pombe   714 IAMREVPEDEYQRWSTVFETAASSLVDRAQKLMDAAEEIEKDLILLGATAIEDRLQDGVPDTIST 778

 Frog   719 LARADIKIWVLTGDKKETAENIGYSCKLLDDDTEILYGEDINVHLQTRMENQRNQMSGNQGAQSN 783
            |..|.|||||||||::|||.|||.||||:|:|..:     :.|:.:|:.....:.|:.......|
pombe   779 LQTAGIKIWVLTGDRQETAINIGMSCKLIDEDMGL-----VIVNEETKEATAESVMAKLSSIYRN 838

 Frog   784 QSGAFLPTDKKHALIITGSWLNEILLEKKKRKKKRLKLKFPRTKEEKEQQLHEKLKAYALKEQRQ 848
            :  |.....:..||:|.|..|                                   .|||....:
pombe   839 E--ATTGNVESMALVIDGVSL-----------------------------------TYALDFSLE 866

 Frog   849 RSFVDLACECSAVICCRVTPKQKAMVVDLVKRYKKAVTLAIGDGANDVNMIKTAHIGVGISGQEG 913
            |.|.:||..|.|||||||:|.|||::|.:|||....|.||||||||||.||:.||:||||||.||
pombe   867 RRFFELASLCRAVICCRVSPLQKALIVKMVKRNTGEVLLAIGDGANDVPMIQAAHVGVGISGMEG 931

 Frog   914 MQAVMSSDYSFAQFRYLQRLLLVHGRWSYIRMCKFLRYFFYKNFSFTLVHFWYSFFNGFSAQTVY 978
            :|||.|||:|.:||.||::||||||.|.|.|:.|.:.|.||||.:..:..|||:|.|.||.|.::
pombe   932 LQAVRSSDFSISQFCYLKKLLLVHGSWCYQRLSKLILYSFYKNIALYMTQFWYAFCNAFSGQVIF 996

 Frog   979 EDWFITLYNVLYSSLPVLLVGLLDQDVSDKLSLAFPRLYVPGQKDLLFNYKKFFLSLFHGIVTSL 1043
            |.|.|:|||||::.||.:::|:.||.||......:|:||..||:...||.|:|:..:.:|...||
pombe   997 ESWSISLYNVLFTVLPPVVIGIFDQFVSAGQLFQYPQLYQLGQRSEFFNLKRFWSWITNGFYHSL 1061

 Frog  1044 IIFFIPYGAFLLT-MGQDGEAPSDYQSFAVTTATALVITVNFQIGLDTSYWTFVNAFSIFGSIAI 1107
            ::|......|... ..:||.| |.:..:..|...|::.||..:..|.:::||.....:..||..:
pombe  1062 LLFLCSIAVFYYDGPNKDGLA-SGHWVWGTTLYAAILATVLGKAALISNHWTQYTVIATLGSFLL 1125

 Frog  1108 YFGIMFDLHSAGIHVLFPSMFIFTGAAPNALR--------QPYLWLTIILTVAFCLLPIVAL--- 1161
            :  |:|             |.|:..||| |:.        .|:|:..:....:..:||.:||   
pombe  1126 W--IVF-------------MPIYAVAAP-AIGFSKEYYGIIPHLYGNLKFWASLLVLPTIALMRD 1174

 Frog  1162 ---RFLAKTIWPSESDKIQKKGKKFKAEVEQRAKPKPFARGVSTRRSAYAFSHQRGYADLISSGR 1223
               ::.::..:|.|...:|:. :|:.. .:.|.:...|.:.:...|.......|||||  .|.|.
pombe  1175 FVWKYSSRMYYPEEYHYVQEI-QKYNV-TDYRPRIVGFHKAIRKIRQMQRMRKQRGYA--FSQGE 1235

 Frog  1224 SIRKKRASLDAVFDNYPAQITH 1245
            ..:.:      :.|.|  ..||
pombe  1236 EDQSR------ILDAY--DTTH 1249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atp8b1NP_001025562.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 13/53 (25%)
P-type_ATPase_APLT_Dnf-like 92..1049 CDD:319770 404/961 (42%)
SPBC887.12NP_596486.1 PhoLip_ATPase_N 147..208 CDD:292826 22/60 (37%)
ATPase-Plipid 157..1194 CDD:273734 434/1107 (39%)
E1-E2_ATPase 213..>307 CDD:278548 47/93 (51%)
Cation_ATPase 590..686 CDD:289987 52/95 (55%)
HAD_like <736..935 CDD:304363 102/240 (43%)
PhoLip_ATPase_C 935..1186 CDD:292829 88/267 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53737
OrthoFinder 1 1.000 - - FOG0000076
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X168
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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