DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atp8b1 and tat-2

DIOPT Version :9

Sequence 1:NP_001025562.1 Gene:atp8b1 / 594952 XenbaseID:XB-GENE-490143 Length:1250 Species:Xenopus tropicalis
Sequence 2:NP_001294447.1 Gene:tat-2 / 177256 WormBaseID:WBGene00019166 Length:1349 Species:Caenorhabditis elegans


Alignment Length:1261 Identity:597/1261 - (47%)
Similarity:796/1261 - (63%) Gaps:135/1261 - (10%)


- Green bases have known domain annotations that are detailed below.


 Frog    43 NRRNVQAEQSREPVIKECTWQVKANDRNFYDQPEFKKKVFLCLKKSKYAGNAIKTYKYNPITFLP 107
            |.:|...|:           :::||||.:..|             .|||.|.|||.|||.|||:|
 Worm    48 NEKNAPTER-----------RLRANDREYNAQ-------------FKYADNVIKTSKYNIITFIP 88

 Frog   108 VNLYEQFKRAANAYFLVLLILQTIPQISTVTWSTTLIPLLLVLGITAIKDLVDDIARHKMDNEIN 172
            .||:|||:|.||.|||||:|||.|||||:::|.:|.:||::||..:||||..||..||..|..:|
 Worm    89 QNLFEQFQRIANFYFLVLMILQFIPQISSISWYSTAVPLVIVLAFSAIKDGYDDAQRHISDRNVN 153

 Frog   173 NRPSEVITDGRFKKTKWKHIHVGDIIRINKNEFVPADVLLLSSSDPNSLCYVETAELDGETNLKF 237
            .|.|.|:.:|...:..|.::.|||:||:..|:||.||:||||:|:|..:|::||.|||||||||.
 Worm   154 GRKSYVVRNGSLCEEDWSNVKVGDVIRMMSNQFVAADLLLLSTSEPYGVCFIETMELDGETNLKN 218

 Frog   238 KMSLEITDKLLQKEEQLAGFDGLVECEEPNNRLDKFVGTLFWRGNSFGLDADKILLRGCTVRNTE 302
            :.::..|.::....:.:..|||.:.||.|||:||||.|.|.|..:.:|::.|.||||||.::||.
 Worm   219 RAAIACTQEMGDDLDGITRFDGEIICEPPNNKLDKFNGKLIWNNHEYGVNNDNILLRGCILKNTR 283

 Frog   303 YCHGLVLFAGADTKIMRNSGKTRLKRTKIDYLMNYMVYTIFVLLILAAAGLAIGQTFWEAKLGAA 367
            :|:|:|:|||.|||:|.|||||:.|||.:|..:|.::..|.:.||.......|....||.:.|..
 Worm   284 WCYGVVVFAGKDTKLMMNSGKTKFKRTSLDRFLNILIVGIVLFLIAMCLICTILCAVWEYQTGRY 348

 Frog   368 NVSWYLYDGNNYSPSYRG--------FLAFWGYIIVLNTMVPISLYVSVEVIRLGQSYFINWDLQ 424
            ...:..:|....||..||        ||.|:.|||:|||:||||||||||:||...|.:||:|.|
 Worm   349 FTIYLPWDDVVPSPEQRGGRQIALIAFLQFFSYIILLNTVVPISLYVSVEIIRFIHSLWINYDTQ 413

 Frog   425 MYF--SPKDTPAKARTTTLNEQLGQIQYIFSDKTGTLTQNIMTFKKCTINGTTYGDDDDEL---- 483
            ||:  ..|..||||.||||||:|||:||:|||||||||:|||||.||||||.:|||..|..    
 Worm   414 MYYENGEKSVPAKAHTTTLNEELGQVQYVFSDKTGTLTRNIMTFNKCTINGISYGDIYDHKGEVI 478

 Frog   484 -KSGQTKQVDFSWNPLADPSFTFHDNYLIEQIRAGKDKDVYEFFKLLALCHTVMAEKTDGELIYQ 547
             .:.:||.:|||||..::|:|.|.|..|::..:. :..::.:|::|||||||||.|:..|:|:||
 Worm   479 ETNDKTKSLDFSWNSASEPTFKFFDKNLVDATKR-QVPEIDQFWRLLALCHTVMPERDKGQLVYQ 542

 Frog   548 AASPDEGALVTAARNFGFVFLSRTQSTITISELGQEKTYEVLAILDFNSDRKRMSIIVRQPDGRI 612
            |.||||.||.:||||||:||.:||..:|||..:|.|:|:|:|||||||:||||||:||:.|||:|
 Worm   543 AQSPDEHALTSAARNFGYVFRARTPQSITIEVMGNEETHELLAILDFNNDRKRMSVIVKGPDGKI 607

 Frog   613 RLYCKGADTVIYERLHPDNP--IKDQTQKALDIFANASLRTLCLCYKDINKGDFENWSKKYKQAS 675
            ||||||||.:|.:|:||...  ::..|...|..|||..||||||.|||::...|.:|..:.|:||
 Worm   608 RLYCKGADMMIMQRIHPSTSQIMRTSTNTHLADFANIGLRTLCLGYKDLDPAYFSDWDSRVKKAS 672

 Frog   676 VATSNRDEALDRVYEAIETDLKLLGATAIEDKLQDDVSGTIFNLARADIKIWVLTGDKKETAENI 740
            .|..:|:.|:|.:||.||.||.|:|||||||||||.|...|..|:.|:||||||||||.|||.||
 Worm   673 AAMQDRESAVDALYEEIEKDLILIGATAIEDKLQDGVPEAIARLSEANIKIWVLTGDKTETAINI 737

 Frog   741 GYSCKLLDDDTE---ILYGE-DINVHLQTR-----------------------MENQRNQMSGNQ 778
            .|||:||.|:|:   ::.|: |..|.:|.:                       :|....:.....
 Worm   738 AYSCRLLTDETKEIVVVDGQTDTEVEVQLKDTRNTFEQILALPSPLGGKPRIEIETIHEESEAIS 802

 Frog   779 GAQSNQSGAFLPTDK-----KH-----ALIITGSWLNEILLEKKKRKKKRLKLKFPRTKEEKEQQ 833
            .|:|.......|..|     :|     ||:|.|..|                             
 Worm   803 SARSMDRNIVTPDLKSAEMAEHESGGVALVINGDSL----------------------------- 838

 Frog   834 LHEKLKAYALKEQRQRSFVDLACECSAVICCRVTPKQKAMVVDLVKRYKKAVTLAIGDGANDVNM 898
                  |:||..:.:|:|:::||.|:|||||||||.|||.|||||||.||||||:||||||||:|
 Worm   839 ------AFALGPRLERTFLEVACMCNAVICCRVTPLQKAQVVDLVKRNKKAVTLSIGDGANDVSM 897

 Frog   899 IKTAHIGVGISGQEGMQAVMSSDYSFAQFRYLQRLLLVHGRWSYIRMCKFLRYFFYKNFSFTLVH 963
            |||||||||||||||||||::||||..||:||:||||||||||||||.|||||||||||:|||.:
 Worm   898 IKTAHIGVGISGQEGMQAVLASDYSIGQFKYLERLLLVHGRWSYIRMAKFLRYFFYKNFAFTLTN 962

 Frog   964 FWYSFFNGFSAQTVYEDWFITLYNVLYSSLPVLLVGLLDQDVSDKLSLAFPRLYVPGQKDLLFNY 1028
            ||||||.|:|||||::...|..||:.:::||||.:|.|||||.|..||.:|:||:|||.:|.||.
 Worm   963 FWYSFFCGYSAQTVFDAVLIACYNLFFTALPVLAMGSLDQDVDDHYSLRYPKLYLPGQFNLFFNM 1027

 Frog  1029 KKFFLSLFHGIVTSLIIFFIPYGAFLLTMGQDGEAPSDYQSFAVTTATALVITVNFQIGLDTSYW 1093
            :.|..|:.||:.:||:|||||||||.......|:...||.:.|.||.||||:.|..||..|||||
 Worm  1028 RIFIYSVLHGMFSSLVIFFIPYGAFYNAAAASGKDLDDYSALAFTTFTALVVVVTGQIAFDTSYW 1092

 Frog  1094 TFVNAFSIFGSIAIYFGIMFDLHS--AGIHVLFPSMFIFTGAAPNALRQPYLWLTIILTVAFCLL 1156
            |.::.|.|:||:.:||.:.|.|:.  ....::..|..|..|.|...:..|:.|.:|::.....||
 Worm  1093 TAISHFVIWGSLVLYFLVCFLLYEWLPVSWIVKTSSSISYGVAFRTMVTPHFWFSILMVSVVLLL 1157

 Frog  1157 PIVALRFLAKTIWPSESDKI---QKKGKKFKAEVEQRAKPKPFARGVSTR-------RSAYAFSH 1211
            |::..||......||.:|::   :|.|||..|:.:   |...|.|..:||       ||.|||||
 Worm  1158 PVMLNRFFWLDTHPSFADRLRIRKKMGKKPSAKDD---KKTAFKRTAATRRSVRGSLRSGYAFSH 1219

 Frog  1212 QRGYADLISSGR------SIRKKRAS 1231
            .:|:.:||..|:      ::|.|..|
 Worm  1220 SQGFGELILKGKLFKNVENLRGKNNS 1245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atp8b1NP_001025562.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 3/8 (38%)
P-type_ATPase_APLT_Dnf-like 92..1049 CDD:319770 514/1010 (51%)
tat-2NP_001294447.1 PhoLip_ATPase_N 60..122 CDD:292826 41/74 (55%)
ATPase-Plipid 71..1178 CDD:273734 564/1142 (49%)
Cation_ATPase 526..615 CDD:289987 60/88 (68%)
R3H 675..738 CDD:294210 39/62 (63%)
HAD_like <885..916 CDD:304363 28/30 (93%)
PhoLip_ATPase_C 916..1172 CDD:292829 128/255 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 283 1.000 Domainoid score I977
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53737
OrthoDB 1 1.010 - - D39163at33208
OrthoFinder 1 1.000 - - FOG0000076
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24092
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X168
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.030

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