DRSC/TRiP Functional Genomics Resources

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Protein Alignment h2ac1 and His2A:CG33832

DIOPT Version :9

Sequence 1:NP_001025500.1 Gene:h2ac1 / 594915 XenbaseID:XB-GENE-5901183 Length:138 Species:Xenopus tropicalis
Sequence 2:NP_001027331.1 Gene:His2A:CG33832 / 3772632 FlyBaseID:FBgn0053832 Length:124 Species:Drosophila melanogaster


Alignment Length:126 Identity:95/126 - (75%)
Similarity:109/126 - (86%) Gaps:7/126 - (5%)


- Green bases have known domain annotations that are detailed below.


 Frog     1 MSGRGK--KVQKAASGKS-SRSAKAGLQFPVGRIHRLLRKGNYAERIGSGSAIYLAATLEYLCAE 62
            ||||||  ||:    ||: |||.:||||||||||||||||||||||:|:|:.:||||.:|||.||
  Fly     1 MSGRGKGGKVK----GKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAE 61

 Frog    63 VLELAGNAARDNKKSRILPRHIQLAVRNDDELAKLFDGVTIADGGVLPNIQSALLPKKTSK 123
            ||||||||||||||:||:|||:|||:|||:||.||..|||||.||||||||:.||||||.|
  Fly    62 VLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
h2ac1NP_001025500.1 H2A 6..120 CDD:238029 86/116 (74%)
His2A:CG33832NP_001027331.1 PTZ00017 16..124 CDD:185399 85/107 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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