Protein Alignment RBMS2 and HRP1

DIOPT Version :9

• Sequence 1: XP_006719604.1
• Gene: RBMS2 / 5939
• HGNCID: 9909
• Length: 477
• Species: Homo sapiens
• Sequence 2: NP_014518.1
• Gene: HRP1 / 853997
• SGDID: S000005483
• Length: 534
• Species: Saccharomyces cerevisiae
• Alignment Length: 354
• Identity: 76/354 - (21%)
• Similarity: 136/354 - (38%)
• Gaps: 51/354 - (14%)

Human    23 PYVSLAQQMAP-PSPSNSTPNSSSGSNGNDQLSKTNL-------YIRGLQPGTTDQDLVKLCQPY 79
            |:..|.|.|:. ..||:.:|.....:...::.||.:|       :|.||...||:.:|.:....|
Yeast   118 PWEQLQQTMSQFQQPSSQSPPQQQVTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKY 182

Human    80 GKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTA---LKASGVQAQMA-KQQEQDPT-NLYI 139
            |.:...|.:.|..|.:.:|:||:.|:.||:..:.|..   |....:..:.| .:.|||.| .:::
Yeast   183 GTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQDKTGKIFV 247

Human   140 SNLPLSMDEQELEGMLKPFGQVISTRILRD-TSGTSRGVGFARMESTEK----CEAIITHFNGKY 199
            ..:...:..:|.|.....:|.:|..:::.| .:|.|||.||...:|.:.    |:.....|..:.
Yeast   248 GGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRK 312

Human   200 IKTPPGVPAPSDPLLCKFA--DGGPKKRQNQGKFVQNGRAWPRNADMGVMALTYDPTTALQNGFY 262
            |:.....|...........  :||....:..|.|...|       |.              |..|
Yeast   313 IEIKRAEPRHMQQKSSNNGGNNGGNNMNRRGGNFGNQG-------DF--------------NQMY 356

Human   263 PAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQVPNPSWMHHHSYLMQPSGSVLTPGMDH 327
            ..|.....|.|:...|::.|.......||::.:.:.:     .:...:...||.. :::.||...
Yeast   357 QNPMMGGYNPMMNPQAMTDYYQKMQEYYQQMQKQTGM-----DYTQMYQQQMQQM-AMMMPGFAM 415

Human   328 PISLQPASMMGPLTQQLGHLSLSSTVYAD 356
            |    |.:|.....||..:.:..|...:|
Yeast   416 P----PNAMTLNQPQQDSNATQGSPAPSD 440

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RBMS2	XP_006719604.1	RRM1_MSSP1	49..134	CDD:240914	25/95 (26%)
		RRM2_MSSP2	135..220	CDD:240918	17/92 (18%)
HRP1	NP_014518.1	PABP-1234	<144..463	CDD:130689	69/328 (21%)
		RRM1_Hrp1p	161..236	CDD:409991	20/74 (27%)
		RRM2_Hrp1p	244..321	CDD:409767	15/76 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910