DRSC/TRiP Functional Genomics Resources

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Protein Alignment RXFP1 and Toll-6

DIOPT Version :10

Sequence 1:NP_001240656.1 Gene:RXFP1 / 59350 HGNCID:19718 Length:784 Species:Homo sapiens
Sequence 2:NP_524081.1 Gene:Toll-6 / 39663 FlyBaseID:FBgn0036494 Length:1514 Species:Drosophila melanogaster


Alignment Length:399 Identity:108/399 - (27%)
Similarity:168/399 - (42%) Gaps:104/399 - (26%)


- Green bases have known domain annotations that are detailed below.


Human   135 GLELDCDET-----NLRAVPSVSSNVTAMS---------------LQWNLIRKLPPDCFKNYHDL 179
            |:.:..|:.     ||:.:...|:.:.|:.               ||.|.|..|.|..|.|...|
  Fly   312 GISMIADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQL 376

Human   180 QKLYLQNNKITS--ISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISP 242
            |.|.|..|:|||  |....|.||..|..|.||||::|.|:|.:|.||:.|:.|.:..|.|..|:.
  Fly   377 QALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAA 441

Human   243 PTF---------------------YGLNSLILLVLM---NNVLTRL-PDKPLCQHMPRLHWLDLE 282
            .||                     |.||.|.:|.|:   ||.|..: ||  ..::...|..|:|.
  Fly   442 DTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPD--AFRNCSALQDLNLN 504

Human   283 GNHIHN----LRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFK 343
            ||.:..    |||:     .:|..:.:.:|.|..:.::.|..|..|..|.|..|.:||:....|:
  Fly   505 GNQLKTVPLALRNM-----RHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITMHTFR 564

Human   344 DLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPL-----MNLSHIYFKK 403
            ||..|..|||:.|.|..::...|:....::::.|:|.|:::| ..:|..:     :|:|....:.
  Fly   565 DLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELNDI-NGLFSNMPSLLWLNISDNRLES 628

Human   404 FQYCGYAPHVRSCKPNTDGISSLE------NLLASIIQRVFVWVVSAVTCFGNIFVICMRPYIRS 462
            |.| |:.|            |:|:      |.|:|:..|           ||          :.|
  Fly   629 FDY-GHVP------------STLQWLDLHKNRLSSLSNR-----------FG----------LDS 659

Human   463 ENKLYAMSI 471
            |.||..:.:
  Fly   660 ELKLQTLDV 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RXFP1NP_001240656.1 LDLa 27..62 CDD:238060
leucine-rich repeat 155..178 CDD:275380 9/37 (24%)
LRR <173..>387 CDD:443914 77/244 (32%)
leucine-rich repeat 179..202 CDD:275380 12/24 (50%)
leucine-rich repeat 203..226 CDD:275380 12/22 (55%)
leucine-rich repeat 227..250 CDD:275380 9/43 (21%)
leucine-rich repeat 251..275 CDD:275380 8/27 (30%)
leucine-rich repeat 276..299 CDD:275380 8/26 (31%)
leucine-rich repeat 300..323 CDD:275380 5/22 (23%)
leucine-rich repeat 324..347 CDD:275380 9/22 (41%)
leucine-rich repeat 348..371 CDD:275380 7/22 (32%)
leucine-rich repeat 372..393 CDD:275380 5/20 (25%)
7tmA_RXFP1_LGR7 433..719 CDD:320631 7/39 (18%)
TM helix 1 434..460 CDD:320631 3/25 (12%)
TM helix 2 467..492 CDD:320631 0/5 (0%)
TM helix 3 512..542 CDD:320631
TM helix 4 553..575 CDD:320631
TM helix 5 603..632 CDD:320631
TM helix 6 648..678 CDD:320631
TM helix 7 687..712 CDD:320631
Toll-6NP_524081.1 PPP1R42 <135..>242 CDD:455733
leucine-rich repeat 148..171 CDD:275380
leucine-rich repeat 172..201 CDD:275380
LRR_8 200..>246 CDD:404697
leucine-rich repeat 202..278 CDD:275380
leucine-rich repeat 229..249 CDD:275380
leucine-rich repeat 279..302 CDD:275380
LRR 299..654 CDD:443914 101/362 (28%)
leucine-rich repeat 303..326 CDD:275380 2/13 (15%)
leucine-rich repeat 327..350 CDD:275380 3/22 (14%)
leucine-rich repeat 352..375 CDD:275380 8/22 (36%)
leucine-rich repeat 376..401 CDD:275380 12/24 (50%)
leucine-rich repeat 402..425 CDD:275380 12/22 (55%)
leucine-rich repeat 426..449 CDD:275380 7/22 (32%)
leucine-rich repeat 450..473 CDD:275380 4/22 (18%)
leucine-rich repeat 474..497 CDD:275380 7/24 (29%)
leucine-rich repeat 498..518 CDD:275380 7/19 (37%)
leucine-rich repeat 521..544 CDD:275380 5/22 (23%)
leucine-rich repeat 545..566 CDD:275380 7/20 (35%)
leucine-rich repeat 569..592 CDD:275380 7/22 (32%)
leucine-rich repeat 593..615 CDD:275380 5/22 (23%)
leucine-rich repeat 616..637 CDD:275380 6/33 (18%)
leucine-rich repeat 638..662 CDD:275380 9/44 (20%)
LRR_8 662..719 CDD:404697 2/7 (29%)
leucine-rich repeat 663..684 CDD:275380 1/6 (17%)
leucine-rich repeat 685..708 CDD:275380
leucine-rich repeat 709..728 CDD:275380
LRR <863..>990 CDD:443914
leucine-rich repeat 885..908 CDD:275380
leucine-rich repeat 909..932 CDD:275380
leucine-rich repeat 933..956 CDD:275380
TIR 1114..1247 CDD:214587
Blue background indicates that the domain is not in the aligned region.

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