DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBM3 and NSR1

DIOPT Version :10

Sequence 1:NP_006734.1 Gene:RBM3 / 5935 HGNCID:9900 Length:157 Species:Homo sapiens
Sequence 2:NP_011675.1 Gene:NSR1 / 853064 SGDID:S000003391 Length:414 Species:Saccharomyces cerevisiae


Alignment Length:140 Identity:52/140 - (37%)
Similarity:74/140 - (52%) Gaps:7/140 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
            |.....||:|.|:||.|..|:.:.|:..|.:..|.:....||::.:|||::.|:|.|.|..|:.|
Yeast   263 SEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDA 327

Human    67 MNGESLDGRQIRVDHAGKSAR--GTRGG--GFGAHGRGRSYSRGGGDQGYGSGRYYDSRPGGYGY 127
            :.||.:|.|.:|:|.:.....  |.|||  |||..|.||..:||.|.:|...|.....||.|.|.
Yeast   328 LQGEYIDNRPVRLDFSSPRPNNDGGRGGSRGFGGRGGGRGGNRGFGGRGGARGGRGGFRPSGSGA 392

Human   128 G---YGRSRD 134
            .   .||||:
Yeast   393 NTAPLGRSRN 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBM3NP_006734.1 RRM_CIRBP_RBM3 6..85 CDD:409883 28/78 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..157 23/61 (38%)
NSR1NP_011675.1 RRM1_gar2 169..244 CDD:409881
RRM2_gar2 269..341 CDD:409882 27/71 (38%)
Blue background indicates that the domain is not in the aligned region.

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