Protein Alignment RBM3 and cirbpb

DIOPT Version :9

• Sequence 1: NP_006734.1
• Gene: RBM3 / 5935
• HGNCID: 9900
• Length: 157
• Species: Homo sapiens
• Sequence 2: NP_001035411.2
• Gene: cirbpb / 678563
• ZFINID: ZDB-GENE-030131-5841
• Length: 206
• Species: Danio rerio
• Alignment Length: 204
• Identity: 98/204 - (48%)
• Similarity: 119/204 - (58%)
• Gaps: 53/204 - (25%)

Human     3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67
            |:|||||:|||:::|.||:||:.||.:|.|::|.|::||||.|||||||:||.|||.|..||.||
Zfish     2 SDEGKLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAM 66

Human    68 NGESLDGRQIRVDHAGKSA------------------RGTRGGGFGAHGRGRSY----------- 103
            ||:.:|||.||||.||||.                  ||:||.|.|.:|..|||
Zfish    67 NGKQVDGRMIRVDEAGKSGGRSGGFRGGSRGGGRGFFRGSRGRGGGGYGGDRSYGSDRSFGGDRS 131

Human   104 -----SRGGGDQGYGSGRY---------------YDSRPGGYGYGYGRSRDYNGRNQGGYDRYSG 148
                 |.||||:|||.|..               |.:|.|||..| |..||  .|||||||| ||
Zfish   132 YGGDRSYGGGDRGYGGGERSYGGGDRSYGGGGGGYSNRSGGYSSG-GGYRD--NRNQGGYDR-SG 192

Human   149 GNYRDNYDN 157
            |:|||.||:
Zfish   193 GSYRDGYDS 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RBM3	NP_006734.1	RRM_CIRBP_RBM3	6..85	CDD:409883	50/78 (64%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	81..157		47/124 (38%)
cirbpb	NP_001035411.2	RRM	<2..>81	CDD:223796	50/78 (64%)
		RRM_SF	5..83	CDD:302621	49/77 (64%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
NCBI	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG43500
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000446
OrthoInspector	1	1.000	-	-		otm28540
orthoMCL	1	0.900	-	-		OOG6_100265
Panther	1	1.100	-	-	O	PTHR48034
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	7	6.880