Protein Alignment RBM3 and SPOM_SPAC25G10.01

DIOPT Version :10

• Sequence 1: NP_006734.1
• Gene: RBM3 / 5935
• HGNCID: 9900
• Length: 157
• Species: Homo sapiens
• Sequence 2: NP_001342863.1
• Gene: SPOM_SPAC25G10.01 / 3361412
• PomBaseID: SPAC25G10.01
• Length: 297
• Species: Schizosaccharomyces pombe
• Alignment Length: 166
• Identity: 51/166 - (30%)
• Similarity: 73/166 - (43%)
• Gaps: 44/166 - (26%)

Human     2 SSEEGK------LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60
            |:.||.      |||.|:.....|..|:..||.||.::.|.::::..|:.||||||::|:..|.|
pombe    91 SAPEGSENLGNDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEA 155

Human    61 SVAMRAMNGESLDGRQIRVDHAGKSARGTRGGGFGAHGRGRSYSRGGGDQGYGSGRYYDSRPGGY 125
            :.|:..:|.:...||.:.|..|.:|                              |.:...||.|
pombe   156 TSAIDNLNSQEFYGRVLNVQKAKRS------------------------------RPHSPTPGKY 190

Human   126 GYGYGR---SRDYNGRNQ-GGYDRYSGGNYRDNYDN 157
             .||.|   |||:...|: |||.|   .||||...|
pombe   191 -MGYDRRRNSRDFPSNNKDGGYRR---NNYRDRDSN 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RBM3	NP_006734.1	RRM_CIRBP_RBM3	6..85	CDD:409883	28/84 (33%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	81..157		21/79 (27%)
SPOM_SPAC25G10.01	NP_001342863.1	PABP-1234	56..>201	CDD:130689	39/140 (28%)
		RRM	103..174	CDD:214636	25/70 (36%)
		U2AF_lg	207..>283	CDD:273727	9/19 (47%)