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Protein Alignment RBM3 and rbm-3.1
DIOPT Version :9
Sequence 1: | NP_006734.1 |
Gene: | RBM3 / 5935 |
HGNCID: | 9900 |
Length: | 157 |
Species: | Homo sapiens |
Sequence 2: | NP_493022.1 |
Gene: | rbm-3.1 / 173070 |
WormBaseID: | WBGene00011155 |
Length: | 83 |
Species: | Caenorhabditis elegans |
Alignment Length: | 77 |
Identity: | 35/77 - (45%) |
Similarity: | 45/77 - (58%) |
Gaps: | 0/77 - (0%) |
- Green bases have known domain annotations that are detailed below.
Human 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESL 72
::||...|.|.|:.|.:.|||.|.|:.|.:|.||||.|.|||.||.|.....|..|:..|||...
Worm 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNGAEF 71
Human 73 DGRQIRVDHAGK 84
:||.:||:.|.|
Worm 72 NGRPLRVNLANK 83
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000446 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_100265 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
4 | 3.770 |
|
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