DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF350 and Zfp212

DIOPT Version :9

Sequence 1:XP_016882583.1 Gene:ZNF350 / 59348 HGNCID:16656 Length:574 Species:Homo sapiens
Sequence 2:XP_006236507.1 Gene:Zfp212 / 297066 RGDID:1307836 Length:492 Species:Rattus norvegicus


Alignment Length:441 Identity:113/441 - (25%)
Similarity:182/441 - (41%) Gaps:113/441 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    10 LEDVAVDFTWEEWQLLGAAQKDLYRDVMLENYSNLVAVGYQASKPDALFKLEQGEQLW--TIEDG 72
            ||:..|.|:.:||:.|...||:|||:||..||..||::.. ..:|:.  ::|.|.::.  .:|:|
  Rat   143 LENDGVCFSEQEWENLEDWQKELYRNVMESNYETLVSLKV-LGQPEE--EVELGAEMVGDLVEEG 204

Human    73 IHSGACSDRVLLCAQAGAQWCELGSPQPPPPGFKRFLCLSPTPAPYLAHDIWKVDHVLERLQSES 137
            .|   .:||.:                                                 ::.|.
  Rat   205 TH---LADRAM-------------------------------------------------VKQEM 217

Human   138 LVNRRKPCHEHDAFENIVHCSKSQFLLGQNHDIF-DLRGKS--LKSNLTLVNQSKGYEIKNSVEF 199
            |..:..|......|.:   .::.|...|....:| :..|.|  |:|                   
  Rat   218 LYKQEGPSGLPSMFSS---AAEPQACFGSEQAVFWNSPGDSALLES------------------- 260

Human   200 TGNGDSFLHANHERLHTAIKFPASQKLISTKSQFISPKHQKTRKLEKHHVCSECGKA-FIKKSWL 263
             |.|||    |.|.:.:: :.||..:.:.      .|:.||:.:  :..:..|||:. .:|:.  
  Rat   261 -GPGDS----NPESVESS-RDPAPGRNLD------CPRKQKSHR--QVQLGQECGQGPKVKRD-- 309

Human   264 TDHQVMHTGEKPHRCSLCEKAFSRKFMLTEHQRTHTGEKPYECPECGKAFLKKSRLNIHQKTHTG 328
                     ..|::||.|:.:|..|..||.|.::||..:.|...|..::...:.||....|.   
  Rat   310 ---------TSPYKCSECQISFRYKQQLTAHLQSHTSRESYSATEPEESLRPRPRLKPQAKR--- 362

Human   329 EKPYICSECGKGFIQKGNLIVHQRIHTGEKPYICNECGKGFIQKT--CLIAHQRFHTGKTPFVCS 391
            .|.:.|..|.:.|..|.:|:.|||.|..|.|....:..:.|...:  .|..|..:...::..:|.
  Rat   363 SKLHQCDVCHRSFSCKVSLVTHQRCHQQEGPSTSPQIQERFSPNSLVALPGHIPWRKSRSSLICG 427

Human   392 ECGKSCSQKSGLIKHQRIHTGEKPFECSECGKAFSTKQKLIVHQRTHTGER 442
            .||||.|..|.|::||||||||:|:.|.||.|:|..||.|:.||:.|..||
  Rat   428 YCGKSFSHPSDLVRHQRIHTGERPYSCPECEKSFVQKQHLLQHQKIHQRER 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF350XP_016882583.1 None
Zfp212XP_006236507.1 KRAB_A-box 142..180 CDD:143639 18/36 (50%)
zf-C2H2 313..335 CDD:278523 8/21 (38%)
C2H2 Zn finger 315..335 CDD:275368 8/19 (42%)
COG5048 <329..>474 CDD:227381 51/147 (35%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
C2H2 Zn finger 426..446 CDD:275368 11/19 (58%)
zf-C2H2 426..446 CDD:278523 11/19 (58%)
zf-H2C2_2 438..463 CDD:290200 15/24 (63%)
C2H2 Zn finger 454..474 CDD:275368 10/19 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
HGNC 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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