DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF350 and LOC100493522

DIOPT Version :9

Sequence 1:XP_016882583.1 Gene:ZNF350 / 59348 HGNCID:16656 Length:574 Species:Homo sapiens
Sequence 2:XP_002943633.3 Gene:LOC100493522 / 100493522 -ID:- Length:837 Species:Xenopus tropicalis


Alignment Length:536 Identity:183/536 - (34%)
Similarity:252/536 - (47%) Gaps:112/536 - (20%)


- Green bases have known domain annotations that are detailed below.


Human     1 MIQAQESITLEDVAVDFTWEEWQLLGAAQKDLYRDVMLENYSNLVAVGYQASKPD--ALFKLEQG 63
            ::..:.::..::|....|.|:|:.| .|:...|||...|:       ..:|...|  .:.:||: 
 Frog   145 LLTGEVAVQWKEVPASVTMEDWETL-KAKTAAYRDTNRES-------DQRADWEDQREVKELEE- 200

Human    64 EQLWTIEDGIHSGACSDRVLLCAQAGAQWCELGSPQPPPPGFKRFLCLSPTPAPY-LAHDIWKVD 127
               ||:. |.:....|:.....:..|.     ..|..||        .:|...|: ::|.|.:..
 Frog   201 ---WTLH-GTNGFPRSESEAADSPQGQ-----NLPNSPP--------TAPQSPPHCISHGIKQEQ 248

Human   128 HVLERLQSESLVNRRKPCHEHDAFENIVHCSKSQFLLGQNHDIFDLRGKS---LKSNLTLVNQSK 189
            .|.|..:....|  .:|.|:                :.|..|..:...||   :.:..|...|::
 Frog   249 AVWEGGEGSDPV--AQPVHD----------------IKQEADCLEGGRKSVCNVVTEPTQGGQTR 295

Human   190 GYEIKNSVEFTGNGDSFLHANHERLHTAIKFPASQKLISTKSQFISPK----HQKTRKLEKHHVC 250
            |.|.|      ||         :.|.|.::.|.|..:  |....||.:    ::..:...|...|
 Frog   296 GAESK------GN---------KSLATGLEAPTSPGV--TPKLIISDRDLGGYESPQTGGKTFTC 343

Human   251 SECGKAFIKKSWLTDHQVMHTGEKPHRCSLCEKAFSRKFMLTEHQRTHTGEKPYECPECGKAFLK 315
            |||||.|.:::.|.:|..:||||||..|..|.|.|:|:..|.||||||.||||:.|.|||:.|..
 Frog   344 SECGKGFPRRAKLIEHFRIHTGEKPFACDECGKCFTRRAKLVEHQRTHMGEKPFTCTECGRGFTC 408

Human   316 KSRLNIHQKTHTGEK----------------------------PYICSECGKGFIQKGNLIVHQR 352
            :|:|.:|.:||||||                            |:.||||||.|..|.|||.|..
 Frog   409 RSKLIVHHRTHTGEKPFSCSECKKSFACHTELYRHFRIHTGERPFSCSECGKSFRLKSNLIQHSI 473

Human   353 IHTGEKPYICNECGKGFIQKTCLIAHQRFHTGKTPFVCSECGKSCSQKSGLIKHQRIHTGEKPFE 417
            |||||||:.|.|||:||..::.||.|.|.|||:.||.|||||||....:.|.:|.|||||||||.
 Frog   474 IHTGEKPFTCTECGRGFTCRSKLIVHCRTHTGEKPFSCSECGKSFPCHTELYRHFRIHTGEKPFS 538

Human   418 CSECGKAFSTKQKLIVHQRTHTGERPYGCNECGKAFAYMSCLVKHKRIHTREK------------ 470
            ||||||:|..:..||.|...||||:|:.|.||||.||..|.|..|.:.|||||            
 Frog   539 CSECGKSFRLRSNLIQHSIIHTGEKPFTCTECGKCFAQHSHLKVHFQTHTREKPLACSECGKCFA 603

Human   471 -QEAAKVENPPAERHS 485
             |...||.....:||:
 Frog   604 RQSHLKVHRKVHQRHN 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF350XP_016882583.1 None
LOC100493522XP_002943633.3 C2H2 Zn finger 343..363 CDD:275368 9/19 (47%)
COG5048 367..818 CDD:227381 120/253 (47%)
C2H2 Zn finger 371..391 CDD:275368 10/19 (53%)
C2H2 Zn finger 399..419 CDD:275368 8/19 (42%)
C2H2 Zn finger 427..447 CDD:275368 0/19 (0%)
C2H2 Zn finger 455..475 CDD:275368 12/19 (63%)
C2H2 Zn finger 483..503 CDD:275368 10/19 (53%)
C2H2 Zn finger 511..531 CDD:275368 10/19 (53%)
C2H2 Zn finger 539..559 CDD:275368 10/19 (53%)
C2H2 Zn finger 567..587 CDD:275368 10/19 (53%)
C2H2 Zn finger 595..615 CDD:275368 3/19 (16%)
C2H2 Zn finger 632..652 CDD:275368
C2H2 Zn finger 660..680 CDD:275368
C2H2 Zn finger 688..708 CDD:275368
C2H2 Zn finger 716..736 CDD:275368
C2H2 Zn finger 744..764 CDD:275368
C2H2 Zn finger 772..792 CDD:275368
C2H2 Zn finger 800..820 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24404
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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