DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBL2 and Rbf

DIOPT Version :10

Sequence 1:NP_005602.3 Gene:RBL2 / 5934 HGNCID:9894 Length:1139 Species:Homo sapiens
Sequence 2:NP_525036.2 Gene:Rbf / 31027 FlyBaseID:FBgn0015799 Length:845 Species:Drosophila melanogaster


Alignment Length:1162 Identity:291/1162 - (25%)
Similarity:459/1162 - (39%) Gaps:379/1162 - (32%)


- Green bases have known domain annotations that are detailed below.


Human     8 SPPPPPPPPAAAASDEEEEDDGEAEDAAPPAESPTPQIQQRFDELCSRLNMDEAARAEAWDSYRS 72
            |.|.|....|...|......|...|           .|...:..||..||||.....:.:::|..
  Fly     2 SEPDPQELGAEVVSGLVATSDDRLE-----------MINAEYTNLCRDLNMDRQTELQGYETYLE 55

Human    73 MSESYTLEGNDLHWLACALYVACRK-SVPTVS--KGTVEGNYVSLTRILKCSEQSLIEFFNKMKK 134
            :|:..::||...||:.||:|.|||: |.|||:  ...|:||.|||..:|:|.:.|:.||..|:|:
  Fly    56 VSQRCSMEGTASHWMCCAIYTACRRTSTPTVTGQNAVVKGNCVSLNNLLRCCKMSIYEFKTKIKQ 120

Human   135 WEDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQ----RGRKQRRQPC 195
            |.||||||..|....|.|:|.|:::.::.|::..|...||..|..|:...:    .|.....: |
  Fly   121 WCDMANLPQEFVNEIEDLDRKFSITFMLHKRFRIIMDMIFSCPPNEKKHSKYISLHGNHAHGK-C 184

Human   196 TVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSED 260
            :..::...||.||:.||...|..:.|||.||:|::|.:||:|.|.| ...|.:|:||.|:||..:
  Fly   185 SYIKLDDICWRLFLCAKNQKPSNTVDLVTSYNLMICCIDLIYNNVL-AEKRTDLINPKFEGLPSN 248

Human   261 FHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKEENLTGFLEPG 325
            :...|.:  .:|.||:...|.:.:    |||.:|...::..:...::...:.|.::.:.|.|...
  Fly   249 WTELDFR--HNPHCILSNFCDMTE----EAKAMKATTFRQIMSSFFQASTIYGNKDTMLGLLANE 307

Human   326 NFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCLNAGSGTETAERVQMKNILQQH 390
            ||..:.|::|.:||:||||||..||||....||.|.     ..||                    
  Fly   308 NFERNLKSLNISYEQYVLSVGEFDERILSAYDAGEH-----TALN-------------------- 347

Human   391 FDKSKALRIS-TPLTGVRYIKENSPC--------VTPVSTATHSLSRLHTMLTGLRNAPSEKLEQ 446
               .::||.. ||||.    |::.|.        ..||..||:::.:|...  |....|::.::|
  Fly   348 ---DQSLRPPVTPLTR----KQDLPAQPAMAGDKFEPVRNATNNVKQLSAF--GRITEPTDFVKQ 403

Human   447 ILRTCSRDPTQAIANRLKEMFEIYSQHF---QPDEDFSNCAKEIASKHFRFAEMLYYKVLESVIE 508
                    ..:.:..:|..:.|...|.|   .|..:        |...|:.|:..::.:|:.:::
  Fly   404 --------AGEEVIAKLLSIIEEIEQKFLAKYPSTE--------AKSRFQLAKSFFFYLLDQILQ 452

Human   509 QEQKRLGDMDLSGILEQDA----FHRSLLACCLEVVTFSYKPPGNFPFITEIFDVPLYHFYKVIE 569
            .|.:...|:||..:|.|..    |:.:|:|||:|:|..:||....||::.:.|.:..:.|.|:||
  Fly   453 AEIRNKPDIDLKRLLVQKVSLVIFNITLMACCVELVLEAYKTELKFPWVLDCFSISAFEFQKIIE 517

Human   570 VFIR--AEDG-LCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEEVMPPQNLERA 631
            :.:|  :.:| |.|.::||||.|||..|:.|||...|.:||.|...:..:||...|    ||:||
  Fly   518 IVVRHGSHEGCLNRSLIKHLNSIEETCLERLAWARNSTVWEMIASAQLPLPTWLMV----NLDRA 578

Human   632 DEICIAGSPLTPRRVTEVRADTGGLGRSITSPTTLYDRYSSPPASTTRRRLFVENDSPSDGGTPG 696
                 ||                                                          
  Fly   579 -----AG---------------------------------------------------------- 580

Human   697 RMPPQPLVNAVPVQNVSGETVSVTPVPGQTLVTMATATVTANNGQTVTIPVQGIANENGGITFFP 761
                                                                            |
  Fly   581 ----------------------------------------------------------------P 581

Human   762 VQVNVGGQAQAVTGSIQPLSAQALAGSLSSQQVTGTTLQVPGQVAIQQISPGGQQQKQGQSVTSS 826
            :|:                                                              
  Fly   582 LQI-------------------------------------------------------------- 584

Human   827 SNRPRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQL 891
                        |.||||.|..:|::.||::|.:.::..:.||..||.||....|||.||||||.
  Fly   585 ------------FLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIFEHSITHETELMKDRHLDQN 637

Human   892 LMCAIYVMAKVTK-EDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTE 955
            :|||||:..:|.: ||..|.:|||.||.||||.:.|||.|.|                      :
  Fly   638 IMCAIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFI----------------------D 680

Human   956 LNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIYIKQIKTF 1020
            :|:     |..|.::                                 |:|.|||:.|:..::.|
  Fly   681 INE-----DGEPKVK---------------------------------DIIHFYNHTYVPLMRQF 707

Human  1021 AMKYSQANMDAP------PLSPYPFVRTGSPRRIQLSQNHPVYISP-HKNETMLSPREKIFYYFS 1078
            .:.|.....|..      .|||:|..|...|:::  :|:|.:::|. .|||...||.:.: |.|.
  Fly   708 VIDYLNVTPDVSGRASDLQLSPHPKERAAQPKKV--TQSHSLFVSQMSKNEIQQSPNQMV-YSFC 769

Human  1079 NSPSKRLREINSMIRTGETPTKKRGILLEDGSESPAKRICPENHSALLRRLQDVAND 1135
            .||:|.|:.:|..:|.|     ||  :|..|.| |......|...:.:.:::.|.:|
  Fly   770 RSPAKDLQAMNEKVRGG-----KR--MLSFGDE-PGLGTMAETKRSKISQVKAVMDD 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBL2NP_005602.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45 7/36 (19%)
CYCLIN_SF 44..134 CDD:410207 35/92 (38%)
DUF3452 104..239 CDD:463402 50/138 (36%)
Pocket, binds E1A 417..1024 127/617 (21%)
Domain A 417..616 58/208 (28%)
RB_A 417..609 CDD:460364 57/201 (28%)
Spacer 617..827 11/209 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 654..678 0/23 (0%)
SP1-4_N 670..>810 CDD:425404 2/139 (1%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 810..831 0/20 (0%)
Domain B 828..1024 58/196 (30%)
CYCLIN_RBL2 835..1024 CDD:410309 58/189 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 933..999 3/65 (5%)
RbfNP_525036.2 DUF3452 90..228 CDD:463402 50/138 (36%)
RB_A 377..560 CDD:460364 57/200 (29%)
RB_B 582..705 CDD:460363 58/256 (23%)

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