DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RBL2 and rbl2

DIOPT Version :10

Sequence 1:NP_005602.3 Gene:RBL2 / 5934 HGNCID:9894 Length:1139 Species:Homo sapiens
Sequence 2:XP_002937369.2 Gene:rbl2 / 100490373 XenbaseID:XB-GENE-1012835 Length:1089 Species:Xenopus tropicalis


Alignment Length:1122 Identity:747/1122 - (66%)
Similarity:904/1122 - (80%) Gaps:40/1122 - (3%)


- Green bases have known domain annotations that are detailed below.


Human    23 EEEEDDGEAEDAAPPAESPTPQIQQRFDELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWL 87
            :|||::||.:.|       ..|::.|:|||||.|||||.||.|||:.|..:|::||||||.||||
 Frog     3 KEEEEEGEGKQA-------EEQLRCRYDELCSSLNMDERARGEAWEYYSRISQNYTLEGNALHWL 60

Human    88 ACALYVACRKSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERL 152
            ||:||||||::||||.:|||||||||||:||..||.||||||||:||||||||||..||.||::|
 Frog    61 ACSLYVACRQTVPTVGRGTVEGNYVSLTQILSSSELSLIEFFNKIKKWEDMANLPTEFRTRTKKL 125

Human   153 ERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPM 217
            |||||||||:||||:||||::|:.|.||||||.||||||||||||||::.|||||||:.||||||
 Frog   126 ERNFTVSAVLFKKYDPIFQEVFRSPLEEQPRQHRGRKQRRQPCTVSEVYQFCWVLFIHTKGNFPM 190

Human   218 ISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSL 282
            ||||||||||||||||||||||||||.||:||:||||:||.|||.:::.|...:.|||||.||.|
 Frog   191 ISDDLVNSYHLLLCALDLVYGNALQCPNRRELLNPNFQGLPEDFCSREYKAPLEAPCIIETLCGL 255

Human   283 HDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKEENLTGFLEPGNFGESFKAINKAYEEYVLSVGN 347
            |||||||||||||||||||||||::||:||||.::|.|||:||||.:|.||||||||.||||.||
 Frog   256 HDGLVLEAKGIKEHFWKPYIRKLFDKKILKGKSDSLVGFLDPGNFADSVKAINKAYEGYVLSAGN 320

Human   348 LDERIFLGEDAEEEIGTLSRCLNAGSGTETAERVQMKNILQQHFDKSKALRISTPLTGVRYIKEN 412
            ||||:|: ||.|||||.:.:|||...|.|:.||.::...|||:|||.|:||:|||||.::||:|.
 Frog   321 LDERVFM-EDVEEEIGRIGQCLNPSLGMESVERAKVTYNLQQNFDKFKSLRVSTPLTSLKYIREC 384

Human   413 SPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQPD 477
            |||.||:|:|.:.:|||.|:|||.:.||||:|.|:||:||||||:.|..|||||.|.:.::....
 Frog   385 SPCTTPISSAMYCVSRLFTILTGFKPAPSERLLQMLRSCSRDPTKTILRRLKEMSETFCENTDSV 449

Human   478 EDFSNCAKEIASKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACCLEVVTF 542
            .:...| ::|..|:||.||:||||||||||:||:|||||:|:|.|||||.|||||::||||:..|
 Frog   450 AEKQFC-RDITKKYFRLAEVLYYKVLESVIDQEKKRLGDIDMSSILEQDVFHRSLMSCCLEITVF 513

Human   543 SYKPPGNFPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWE 607
            |||||||||.|..:|::..|.|||||||.|:||:|||||||||||.||||||:.:||..:||||:
 Frog   514 SYKPPGNFPSIIVMFELAPYQFYKVIEVVIKAEEGLCREVVKHLNNIEEQILECMAWTHDSPLWD 578

Human   608 KIRDNENRVPTCEEVMPPQNLERADEICIAGSPLTPRRVTEVRADTGGLGRSI-TSPTTLYDRYS 671
            |||:|:.::|.||||:.||:.|::.:....|| |||||:.|:|||..|||||: :||.||.||||
 Frog   579 KIRENDGKIPLCEEVLHPQHFEKSGDNGTTGS-LTPRRINEIRADASGLGRSVPSSPATLCDRYS 642

Human   672 SPPASTTRRRLFVENDSPSDGGTPGRMPPQPLVNAVPVQNVSGETVSVTPVPGQTLVTMATATVT 736
            ||.|.|.||||||:.||.|:.|:|.:..|           ::.:||:..||||||||||||||||
 Frog   643 SPAAGTARRRLFVDPDSSSEAGSPAQASP-----------LATDTVATPPVPGQTLVTMATATVT 696

Human   737 ANNGQTVTIPVQGIANENGGITFFPVQVNVGGQAQAVTGSIQPLSAQALAGSLSSQQVTGTTLQV 801
            ||||||||||||||||||||||||||||||..|..:||.|:.||:||||||.|:.|       |:
 Frog   697 ANNGQTVTIPVQGIANENGGITFFPVQVNVSSQPHSVTSSVPPLTAQALAGPLNPQ-------QI 754

Human   802 PGQVAIQQI--SPGGQQQKQGQSVTSSSNRPRKTSSLSLFFRKVYHLAAVRLRDLCAKLDISDEL 864
            .|||::.|:  || |||.|  |::||   :.:|.|||:||.|:||.||::||:|||.||||||||
 Frog   755 QGQVSVSQVPASP-GQQSK--QNLTS---KLKKASSLTLFCRRVYCLASIRLKDLCLKLDISDEL 813

Human   865 RKKIWTCFEFSIIQCPELMMDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRS 929
            |:|||||||||::.||||:.|||||||||||:||:.||||||.||.|||:|||.||.|.|.||||
 Frog   814 RRKIWTCFEFSLVHCPELIKDRHLDQLLMCAVYVITKVTKEDTSFHNIMKCYRVQPHASSHVYRS 878

Human   930 VLIKGKRKRRNSGSSDSRSHQNSPTELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGAN 994
            ||:| ||:||.|||||......||.|..||..||:.|||||||||||||||:||||||||:|.|.
 Frog   879 VLLK-KRRRRQSGSSDHILQPGSPAENTKDICSREPSPVMRSSSTLPVPQPNSAPPTPTRITAAG 942

Human   995 SDMEEEERGDLIQFYNNIYIKQIKTFAMKYSQAN-MDAPPLSPYPFVRTGSPRRIQLSQNHPVYI 1058
            |:..|||||||:||||||||::||:|||::||:| .:|.||||||.:|..||||||||..|.:|:
 Frog   943 SNFVEEERGDLVQFYNNIYIEKIKSFAMRFSQSNTSEATPLSPYPSIRAVSPRRIQLSHIHSIYV 1007

Human  1059 SPHKNE-TMLSPREKIFYYFSNSPSKRLREINSMIRTGETPTKKRGILLEDGSESPAKRICPENH 1122
            |.|.:: |.:.|||||.|||..||:|||:||||||||||||||||||||||||||||||||.|||
 Frog  1008 STHNDDATTVCPREKICYYFDLSPAKRLQEINSMIRTGETPTKKRGILLEDGSESPAKRICQENH 1072

Human  1123 SALLRRLQDVANDRGSH 1139
            |||:|||||||||||:|
 Frog  1073 SALIRRLQDVANDRGTH 1089

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBL2NP_005602.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45 6/21 (29%)
CYCLIN_SF 44..134 CDD:410207 64/89 (72%)
DUF3452 104..239 CDD:463402 110/134 (82%)
Pocket, binds E1A 417..1024 384/609 (63%)
Domain A 417..616 122/198 (62%)
RB_A 417..609 CDD:460364 118/191 (62%)
Spacer 617..827 124/212 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 654..678 16/24 (67%)
SP1-4_N 670..>810 CDD:425404 84/139 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 810..831 9/22 (41%)
Domain B 828..1024 138/195 (71%)
CYCLIN_RBL2 835..1024 CDD:410309 136/188 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 933..999 43/65 (66%)
rbl2XP_002937369.2 CYCLIN_SF 23..107 CDD:410207 62/83 (75%)
DUF3452 78..212 CDD:463402 110/133 (83%)
RB_A 389..580 CDD:460364 118/191 (62%)
SP1-4_N <606..>787 CDD:425404 120/205 (59%)
CYCLIN_RBL2 784..972 CDD:410309 136/188 (72%)

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