DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RBL2 and rbl2

DIOPT Version :10

Sequence 1:NP_005602.3 Gene:RBL2 / 5934 HGNCID:9894 Length:1139 Species:Homo sapiens
Sequence 2:XP_002667000.4 Gene:rbl2 / 100331892 ZFINID:ZDB-GENE-061109-2 Length:1079 Species:Danio rerio


Alignment Length:1129 Identity:698/1129 - (61%)
Similarity:858/1129 - (75%) Gaps:67/1129 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    23 EEEEDDGEAEDAAPPAESPTPQIQQRFDELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWL 87
            |||:..|:.:.|              |:|||..|||||.:...||.||.::|::|||||::||||
Zfish     3 EEEDTLGKTKHA--------------FEELCRDLNMDEESSNRAWRSYENISKNYTLEGSELHWL 53

Human    88 ACALYVACRKSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERL 152
            ||:||||||.||||:||||.|||||||||||:.|:|||||||:|||||:||||||..|::.||:|
Zfish    54 ACSLYVACRSSVPTMSKGTAEGNYVSLTRILRSSQQSLIEFFSKMKKWQDMANLPRDFQQSTEKL 118

Human   153 ERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPM 217
            ||||||::||||||.|:|:||||.|.:|.||..|||||||.||||:|:|:|||:|||:|||||||
Zfish   119 ERNFTVTSVIFKKYLPLFRDIFKTPTDELPRTHRGRKQRRHPCTVTEVFNFCWILFIHAKGNFPM 183

Human   218 ISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSL 282
            ||||||||||||||||||||.|||.||:||:|:||.||||.|||::||.||.....|.||:||.|
Zfish   184 ISDDLVNSYHLLLCALDLVYCNALLCSSRKDLLNPAFKGLPEDFNSKDYKPGPGSLCFIEQLCEL 248

Human   283 HDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKEENLTGFLEPGNFGESFKAINKAYEEYVLSVGN 347
            ||||||||||.|||||||:|:||:|:|:|||||:.|||||||.|||:|..::|:.|||:|||.|:
Zfish   249 HDGLVLEAKGAKEHFWKPFIKKLFERKILKGKEDTLTGFLEPVNFGDSLASLNRVYEEHVLSSGS 313

Human   348 LDERIFLGEDAEEEIGTLSRCLNAG--SGTETAERVQMKNILQQHFDKSKALRISTPLTGVRYIK 410
            ||||||||:.|.|:|||      .|  .|.|..:|.  .|.||.....| |||:||||||.||:.
Zfish   314 LDERIFLGDGAREDIGT------PGPYEGIENQDRA--NNPLQNSMTAS-ALRVSTPLTGRRYVP 369

Human   411 ENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFEIYSQHFQ 475
            | |...||||:|..|:.||||:|||.:..||.||..|.|:|.||||:::|.|||||.||:.|:::
Zfish   370 E-SIVGTPVSSAMQSVGRLHTLLTGFKYRPSVKLRDIFRSCIRDPTESVAARLKEMSEIFLQNYE 433

Human   476 -PDEDFSNCAKEIASKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACCLEV 539
             ..:|..:.|::||.|:|..||.||||.||.:|.||:|||||:||||:||||.|||||:|||||:
Zfish   434 GTGDDNKSLARDIAVKYFCLAEALYYKSLEVIINQEKKRLGDVDLSGVLEQDVFHRSLIACCLEI 498

Human   540 VTFSYKPPGNFPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESP 604
            |.|||:|||.||.:.:|||:|.|||||||||.:|||:.|.||||||||.:|||:|:.||||..||
Zfish   499 VIFSYRPPGEFPRVLQIFDLPAYHFYKVIEVLVRAEESLFREVVKHLNHVEEQVLESLAWKGNSP 563

Human   605 LWEKIRDNENRVPTCEEVMPPQNLERADEICIAGSPL-TPRRVTEVRAD-TGGLGRSIT-SPTTL 666
            |||:||:.:|.||.|:||||||:||..     :||.. ||...||...: ..|.|:.:: |||:|
Zfish   564 LWERIREAKNCVPACQEVMPPQHLEDG-----SGSNANTPSSKTEFSGNIAAGAGKGVSPSPTSL 623

Human   667 YDRYSSPPASTTRRRLFVENDSPSDGGTPGRMPPQPLVNAVPVQNVSGETVSVTPVPGQTLVTMA 731
            :|||||||..|..|||||:.|:..:...|.::.|..:|:::|.              |||:||||
Zfish   624 HDRYSSPPTGTAVRRLFVDGDTTPEPAPPVKVAPPSIVSSIPA--------------GQTVVTMA 674

Human   732 TATVTANNGQTVTIPVQGIANENGGITFFPVQVNVGGQAQAVTGSIQPLSAQALAGSLSSQQVTG 796
            ||||||||||||||||||||||:|||||.||||:|..||.|   ::..||||.|.|:|::||:|.
Zfish   675 TATVTANNGQTVTIPVQGIANESGGITFIPVQVSVTSQAGA---TLPTLSAQTLTGTLTTQQLTT 736

Human   797 TTLQVPGQVAIQ-QISPGGQQQKQGQSVTSSSNRPRKTSSLSLFFRKVYHLAAVRLRDLCAKLDI 860
            |.:.     |:| ..||..|.:|..|..| .:.|.:||.||.||||||||||:||||||||||||
Zfish   737 TPMG-----AVQNNPSPPKQDKKTPQQGT-PTKRAQKTGSLCLFFRKVYHLASVRLRDLCAKLDI 795

Human   861 SDELRKKIWTCFEFSIIQCPELMMDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQ 925
            |.:||:|||||||:|::.|.:||||||||||||||||||.|||||||||||||:|||:||||.|.
Zfish   796 SADLRRKIWTCFEYSLVHCTDLMMDRHLDQLLMCAIYVMTKVTKEDKSFQNIMKCYRSQPQASSS 860

Human   926 VYRSVLIKGKRKRRNSGSSDSRSHQNSPTELNKDRTSRDSSPV-MRSSSTLPVPQPSSAPPTPTR 989
            |||||||.| ||||:||::::...|:||||..:::.|.:|||| ||||||||:|||||||.||||
Zfish   861 VYRSVLISG-RKRRHSGNTENTHRQSSPTEGAQEQASGESSPVSMRSSSTLPIPQPSSAPSTPTR 924

Human   990 LTGANSDMEEEERGDLIQFYNNIYIKQIKTFAMKYS-----QANMDAPPLSPYPFVRTGSPRRIQ 1049
            ..|...: :||||||||:|||::||||||.||::||     ....:.|||.|||.:|.|||||:.
Zfish   925 APGGPQE-QEEERGDLIRFYNHVYIKQIKPFALRYSSNSPKNGQAETPPLCPYPSLRIGSPRRVL 988

Human  1050 LSQNHPVYISPHKNETMLSPREKIFYYFSNSPSKRLREINSMIRTGETPTKKRGILLEDGSESPA 1114
            ||.||.:||||||..:.:|||:|||||.|:|||.||||||:||||||||||||.|.||:..:|||
Zfish   989 LSHNHSIYISPHKTGSPISPRDKIFYYVSSSPSHRLREINTMIRTGETPTKKRSIALEEEQQSPA 1053

Human  1115 KRICPENHSALLRRLQDVANDRGS 1138
            ||:|.||.:|||||||||||||.|
Zfish  1054 KRLCQENQTALLRRLQDVANDRSS 1077

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBL2NP_005602.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45 5/21 (24%)
CYCLIN_SF 44..134 CDD:410207 60/89 (67%)
DUF3452 104..239 CDD:463402 105/134 (78%)
Pocket, binds E1A 417..1024 366/612 (60%)
Domain A 417..616 123/199 (62%)
RB_A 417..609 CDD:460364 120/192 (63%)
Spacer 617..827 101/213 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 654..678 13/24 (54%)
SP1-4_N 670..>810 CDD:425404 71/140 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 810..831 7/20 (35%)
Domain B 828..1024 141/196 (72%)
CYCLIN_RBL2 835..1024 CDD:410309 138/189 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 933..999 37/66 (56%)
rbl2XP_002667000.4 None

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