DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRDM13 and MIG2

DIOPT Version :10

Sequence 1:NP_067633.2 Gene:PRDM13 / 59336 HGNCID:13998 Length:707 Species:Homo sapiens
Sequence 2:NP_011306.1 Gene:MIG2 / 852663 SGDID:S000003177 Length:382 Species:Saccharomyces cerevisiae


Alignment Length:61 Identity:23/61 - (37%)
Similarity:34/61 - (55%) Gaps:4/61 - (6%)


- Green bases have known domain annotations that are detailed below.


Human   599 KPLKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEF--CGKVLVRRRDLERHVKSRHPGQS 657
            :|.:|..|.|.|....:..:|:|.|. |..|:.|.|  |||...|..:|:||::: |.|||
Yeast    15 RPFRCDTCHRGFHRLEHKKRHLRTHT-GEKPHHCAFPGCGKSFSRSDELKRHMRT-HTGQS 73

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRDM13NP_067633.2 PR-SET_PRDM13 18..119 CDD:380974
C2H2 Zn finger 137..160 CDD:275369
zf-C2H2 137..159 CDD:395048
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..213
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..255
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..372
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 545..567
C2H2 Zn finger 575..595 CDD:275368
zf-C2H2 575..595 CDD:395048
SFP1 <578..653 CDD:227516 19/55 (35%)
C2H2 Zn finger 603..623 CDD:275368 6/19 (32%)
C2H2 Zn finger 632..650 CDD:275368 9/19 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 647..707 6/11 (55%)
MIG2NP_011306.1 COG5048 1..381 CDD:227381 23/61 (38%)
C2H2 Zn finger 19..39 CDD:275368 6/19 (32%)
C2H2 Zn finger 47..69 CDD:275368 9/22 (41%)
Blue background indicates that the domain is not in the aligned region.

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