DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mccc2 and MCCB

DIOPT Version :9

Sequence 1:NP_652724.1 Gene:Mccc2 / 59261 FlyBaseID:FBgn0042083 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_567950.1 Gene:MCCB / 829549 AraportID:AT4G34030 Length:587 Species:Arabidopsis thaliana


Alignment Length:550 Identity:342/550 - (62%)
Similarity:422/550 - (76%) Gaps:11/550 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VLHSEVDKQSAEYKENAREMASLVGDLRNFTSQVLKGGGQKAIERHTSRGKLLARERINLLLDKG 93
            :|...||:.|..:..|:..|..::.:||:...:||.|||::|::|:.||.|||.||||:.|||.|
plant    49 ILPDGVDRNSEAFSSNSIAMEGILSELRSHIKKVLAGGGEEAVKRNRSRNKLLPRERIDRLLDPG 113

  Fly    94 SPFLELSALAGHELYGEEVVNSGGIVTGVGRVCGTECLVVANDATVKGGSYYPITVKKHLRAQEI 158
            |.|||||.||||||| ||.:.||||:||:|.:.|..|:.:|||.|||||:|||||:|||||||||
plant   114 SSFLELSQLAGHELY-EEPLPSGGIITGIGPIHGRICMFMANDPTVKGGTYYPITIKKHLRAQEI 177

  Fly   159 AQENRLPCIYLVDSGGANLPRQADVFPDKLHFGRIFYNQANMSAQGIPQIAVVMGSCTAGGAYVP 223
            |...|||||||||||||.||:||:|||||.:|||:|||::.||:.||||||:|:|||||||||:|
plant   178 AARCRLPCIYLVDSGGAYLPKQAEVFPDKENFGRVFYNESVMSSDGIPQIAIVLGSCTAGGAYIP 242

  Fly   224 AMADESIIVKKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCKTSGVTDHYALDDEHALYLARQ 288
            ||||||::||..|||||||||||||||||||||||||||.:||..|||:|::|.|:.|.|.:.|.
plant   243 AMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCTVSGVSDYFAQDELHGLAIGRN 307

  Fly   289 IVSNLNLSATNSYNDQLMHSSQVNFQTATPPSAVEEPRYDAEELYGIVGPNLTKSFDVREVIARI 353
            ||.||:::|...........:.|          .:||.||..||..|...:..:.||||.:||||
plant   308 IVKNLHMAAKQGMEGTFGSKNLV----------YKEPLYDINELRSIAPVDHKQQFDVRSIIARI 362

  Fly   354 VDGSRFTEFKKLYGETLVCGFAKLYGHTVGIVGNNGVLFSESALKGAHFIQLCAQRKIPLVFLQN 418
            ||||.|.||||.||.|||.|||::||.||||:||||:||:||||||||||:||:|||||||||||
plant   363 VDGSEFDEFKKQYGTTLVTGFARIYGQTVGIIGNNGILFNESALKGAHFIELCSQRKIPLVFLQN 427

  Fly   419 ITGFMVGRDAEANGIAKNGAKMVTAVACANVPKFTVIIGGSYGAGNYGMCGRAYSPRFLYMWPNS 483
            |||||||..||||||||.|||||.||:||.|||.|:|.|.|:|||||.||||||||.|:::|||:
plant   428 ITGFMVGSRAEANGIAKAGAKMVMAVSCAKVPKITIITGASFGAGNYAMCGRAYSPDFMFIWPNA 492

  Fly   484 RISVMGGTQAANVMAQITEDQRKRAGKEFSEEEAQKLKAPIVEMFEAEGSPYYSTARLWDDGIID 548
            ||.:|||.|||.|:.||....:||.|.:::|||.:..|...|:.:|.|.:||||||||||||:||
plant   493 RIGIMGGAQAAGVLTQIERATKKRQGIKWTEEEEEAFKKKTVDAYEREANPYYSTARLWDDGVID 557

  Fly   549 PANTRQILGLSLKAALNNAGQETKFGVFRM 578
            |.:||::|||.|.||||...::|:||||||
plant   558 PCDTRKVLGLCLSAALNRPLEDTRFGVFRM 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mccc2NP_652724.1 PLN02820 27..578 CDD:178415 340/548 (62%)
crotonase-like <82..254 CDD:304874 127/171 (74%)
crotonase-like <359..>487 CDD:304874 98/127 (77%)
MCCBNP_567950.1 PLN02820 19..587 CDD:178415 340/548 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 636 1.000 Domainoid score I31
eggNOG 1 0.900 - - E1_COG4799
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11145
Inparanoid 1 1.050 689 1.000 Inparanoid score I139
OMA 1 1.010 - - QHG62385
OrthoDB 1 1.010 - - D632665at2759
OrthoFinder 1 1.000 - - FOG0004920
OrthoInspector 1 1.000 - - oto3002
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22855
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4587
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.940

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