DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mccc2 and Mccc2

DIOPT Version :9

Sequence 1:NP_652724.1 Gene:Mccc2 / 59261 FlyBaseID:FBgn0042083 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_084302.1 Gene:Mccc2 / 78038 MGIID:1925288 Length:563 Species:Mus musculus


Alignment Length:559 Identity:390/559 - (69%)
Similarity:446/559 - (79%) Gaps:16/559 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RLLHVGDANVLHSEVDKQSAEYKENAREMASLVGDLRNFTSQVLKGGGQKAIERHTSRGKLLARE 84
            |..|......|.::.|..|:.|:||..:|.:||..|......|..||.:||..|||||||||.|:
Mouse    21 RAYHGDSVARLGTQPDSASSTYQENYEQMKALVSQLHERAQYVRLGGSEKARARHTSRGKLLPRD 85

  Fly    85 RINLLLDKGSPFLELSALAGHELYGEEVVNSGGIVTGVGRVCGTECLVVANDATVKGGSYYPITV 149
            ||:.|:|.||||||.|..||::|||:|.|.:|||:||:|||.|.||::||||||||||:|||:||
Mouse    86 RIDNLIDPGSPFLEFSQFAGYQLYGDEEVPAGGIITGIGRVSGVECMIVANDATVKGGTYYPVTV 150

  Fly   150 KKHLRAQEIAQENRLPCIYLVDSGGANLPRQADVFPDKLHFGRIFYNQANMSAQGIPQIAVVMGS 214
            |||:||||||.:|||||||||||||||||||||.|||:.||||||||||.||::.|.||||||||
Mouse   151 KKHVRAQEIALQNRLPCIYLVDSGGANLPRQADTFPDRDHFGRIFYNQAIMSSKNITQIAVVMGS 215

  Fly   215 CTAGGAYVPAMADESIIVKKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCKTSGVTDHYALDD 279
            ||||||||||||||:|||:|||||||||||||||||||||||||||||||||:.|||||||||||
Mouse   216 CTAGGAYVPAMADENIIVQKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVTDHYALDD 280

  Fly   280 EHALYLARQIVSNLNLSATNSYNDQLMHSSQVNFQTATPPSAVEEPRYDAEELYGIVGPNLTKSF 344
            .|||:|.|::|.:||.              |........||  |||.:.|:|||||||.||.:||
Mouse   281 HHALHLTRKVVRSLNY--------------QKKMDVTIEPS--EEPLFPADELYGIVGANLKRSF 329

  Fly   345 DVREVIARIVDGSRFTEFKKLYGETLVCGFAKLYGHTVGIVGNNGVLFSESALKGAHFIQLCAQR 409
            |||||||||||||||.|||.|||:|||.|||:::|:.|||:|||||||||||.|||||:|||.||
Mouse   330 DVREVIARIVDGSRFNEFKALYGDTLVTGFARIFGYPVGIIGNNGVLFSESAKKGAHFVQLCCQR 394

  Fly   410 KIPLVFLQNITGFMVGRDAEANGIAKNGAKMVTAVACANVPKFTVIIGGSYGAGNYGMCGRAYSP 474
            .|||:|||||||||||||.||.||||:|||||.|||||.|||.||||||||||||||||||||||
Mouse   395 NIPLLFLQNITGFMVGRDYEAEGIAKDGAKMVAAVACAKVPKITVIIGGSYGAGNYGMCGRAYSP 459

  Fly   475 RFLYMWPNSRISVMGGTQAANVMAQITEDQRKRAGKEFSEEEAQKLKAPIVEMFEAEGSPYYSTA 539
            ||||||||:|||||||.|||.|:|.:..||:.|.||:||..|...||.||::.||.||:||||:|
Mouse   460 RFLYMWPNARISVMGGEQAATVLATVARDQKAREGKQFSSAEEAALKEPIIKRFEEEGNPYYSSA 524

  Fly   540 RLWDDGIIDPANTRQILGLSLKAALNNAGQETKFGVFRM 578
            ||||||||||.:||.:|||||.||||...|.|.||:|||
Mouse   525 RLWDDGIIDPVDTRLVLGLSLSAALNAPIQRTDFGIFRM 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mccc2NP_652724.1 PLN02820 27..578 CDD:178415 386/550 (70%)
crotonase-like <82..254 CDD:304874 135/171 (79%)
crotonase-like <359..>487 CDD:304874 105/127 (83%)
Mccc2NP_084302.1 PLN02820 8..563 CDD:178415 379/541 (70%)
Carboxyltransferase. /evidence=ECO:0000255|PROSITE-ProRule:PRU01138 49..555 365/505 (72%)
crotonase-like <84..255 CDD:304874 135/170 (79%)
Acyl-CoA binding. /evidence=ECO:0000255 343..372 24/28 (86%)
crotonase-like <344..535 CDD:304874 147/190 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837252
Domainoid 1 1.000 737 1.000 Domainoid score I101
eggNOG 1 0.900 - - E1_COG4799
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11145
Inparanoid 1 1.050 777 1.000 Inparanoid score I528
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62385
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004920
OrthoInspector 1 1.000 - - oto92751
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22855
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2629
SonicParanoid 1 1.000 - - X4587
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.890

Return to query results.
Submit another query.