DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mccc2 and pccb

DIOPT Version :10

Sequence 1:NP_652724.1 Gene:Mccc2 / 59261 FlyBaseID:FBgn0042083 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_998090.2 Gene:pccb / 405861 ZFINID:ZDB-GENE-040426-2467 Length:555 Species:Danio rerio


Alignment Length:573 Identity:184/573 - (32%)
Similarity:267/573 - (46%) Gaps:81/573 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLRSQVRLLH--------VGDAN---VLHSEVDKQSAEYKENAREMASLVGDLRNFTSQVLKGGG 67
            |:||.:.||:        ||...   ...|:|.:.:..|..:...:...:...|   ...|.|||
Zfish     6 LMRSSLGLLNGLKCHFKCVGQTQYGVFTQSKVLQNARCYSSSHMSVQERIEQKR---QAALTGGG 67

  Fly    68 QKAIERHTSRGKLLARERINLLLDKGSPFLELSALAGHEL--YGEEVVNS----GGIVTGVGRVC 126
            |..|.....||||.||||:.||||..| |:|......|..  :|.|...:    ..:|||.||:.
Zfish    68 QLRIAAQHKRGKLTARERVELLLDADS-FVEYDMFVEHRCSDFGMEADQNKYPGDSVVTGQGRIN 131

  Fly   127 GTECLVVANDATVKGGSYYPITVKKHLRAQEIAQENRLPCIYLVDSGGA-------NLPRQADVF 184
            |....|.:.|.||.|||......:|..:..:.|.....|.|.|.|||||       :|...||:|
Zfish   132 GRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAMLVGAPVIGLNDSGGARIQEGVESLAGYADIF 196

  Fly   185 PDKLHFGRIFYNQANMSAQG-IPQIAVVMGSCTAGGAYVPAMADESIIVKKQGTIFLAGPPLVKA 248
                        ..|:.|.| :|||:::||.|..|..|.||:.|.:.:||....:|:.||.:||:
Zfish   197 ------------LRNVMASGVVPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKS 249

  Fly   249 ATGEEVSAEDLGGADLHCKTSGVTDHYALDDEHALYLARQIVSNLNLSATNSYNDQLMHSSQVNF 313
            .|.|:|:.|:||||..|...|||......:|..||...|...:.|.||..:|             
Zfish   250 VTNEDVTQEELGGAKTHTAVSGVAHRAFENDIDALLNLRDFFNFLPLSNKDS------------- 301

  Fly   314 QTATPPSAVEEPRYD--AEELYGIVGPNLTKSFDVREVIARIVDGSRFTEFKKLYGETLVCGFAK 376
               .|.....:|| |  ...|..:|....||::|:.:::..|||...|.|....|.:.:|.|||:
Zfish   302 ---APVVECHDPR-DRLVPGLDTVVPFESTKAYDMLDIVHGIVDEREFFEIMPNYAKNIVVGFAR 362

  Fly   377 LYGHTVGIVGN-----NGVLFSESALKGAHFIQLCAQRKIPLVFLQNITGFMVGRDAEANGIAKN 436
            :.|.|||||||     :|.|...|::|||.|::.|....||::...::.||:.|...|..||.::
Zfish   363 MNGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCDAFNIPIITFVDVPGFLPGTAQEYGGIIRH 427

  Fly   437 GAKMVTAVACANVPKFTVIIGGSYGAGNYGMCGRAYSPRFLYMWPNSRISVMGGTQAANVMAQIT 501
            |||::.|.|.|.|||.|||...:||.....|..:.......|.||.:.::|||...|..::.:  
Zfish   428 GAKLLYAFAEATVPKITVITRKAYGGAYDVMSSKHLRGDVNYAWPTAEVAVMGAKGAVQIIFR-- 490

  Fly   502 EDQRKRAGKEFSEEEAQKLKAPIVEMFEAEGSPYYSTARLWDDGIIDPANTRQ 554
                   ||: ::.||:   |..||.|   .:|:.:..|.:.|.||.|:.||:
Zfish   491 -------GKQ-NQAEAE---AEYVEKF---ANPFPAAVRGFVDDIIQPSTTRR 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mccc2NP_652724.1 Carboxyl_trans 27..578 CDD:481543 177/552 (32%)
pccbNP_998090.2 None

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