DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mccc2 and Mccc2

DIOPT Version :9

Sequence 1:NP_652724.1 Gene:Mccc2 / 59261 FlyBaseID:FBgn0042083 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_001012177.1 Gene:Mccc2 / 361884 RGDID:1310279 Length:563 Species:Rattus norvegicus


Alignment Length:560 Identity:391/560 - (69%)
Similarity:449/560 - (80%) Gaps:18/560 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RLLHVGDANV-LHSEVDKQSAEYKENAREMASLVGDLRNFTSQVLKGGGQKAIERHTSRGKLLAR 83
            |..| |||.. |.::.|..|:.|:||..:|.:||..|......|..||.:||..|||||||||.|
  Rat    21 RAYH-GDAVARLGTQPDSGSSTYQENYEQMKALVNQLHERAQYVRLGGSEKARARHTSRGKLLPR 84

  Fly    84 ERINLLLDKGSPFLELSALAGHELYGEEVVNSGGIVTGVGRVCGTECLVVANDATVKGGSYYPIT 148
            :||:.|:|.||||||.|..||::|||||.|.:|||:||:|||.|.||::||||||||||:|||:|
  Rat    85 DRIDNLIDPGSPFLEFSQFAGYKLYGEEEVPAGGIITGIGRVSGVECMIVANDATVKGGTYYPVT 149

  Fly   149 VKKHLRAQEIAQENRLPCIYLVDSGGANLPRQADVFPDKLHFGRIFYNQANMSAQGIPQIAVVMG 213
            ||||:||||||.:|||||||||||||||||||||.|||:.||||||||||.||::.|.|||||||
  Rat   150 VKKHVRAQEIALQNRLPCIYLVDSGGANLPRQADTFPDRDHFGRIFYNQAIMSSKNITQIAVVMG 214

  Fly   214 SCTAGGAYVPAMADESIIVKKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCKTSGVTDHYALD 278
            |||||||||||||||:|||::||||||||||||||||||||||||||||||||:.||||||||||
  Rat   215 SCTAGGAYVPAMADENIIVQRQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRRSGVTDHYALD 279

  Fly   279 DEHALYLARQIVSNLNLSATNSYNDQLMHSSQVNFQTATPPSAVEEPRYDAEELYGIVGPNLTKS 343
            |.|||:|.|::|.:||.              |........||  |||.:.|:|||||||.||.:|
  Rat   280 DHHALHLTRKVVRSLNY--------------QKKLDVTVEPS--EEPLFPADELYGIVGANLKRS 328

  Fly   344 FDVREVIARIVDGSRFTEFKKLYGETLVCGFAKLYGHTVGIVGNNGVLFSESALKGAHFIQLCAQ 408
            ||||||||||||||||.|||.|||:|||.|||:::|:.|||:|||||||||||.|||||:|||.|
  Rat   329 FDVREVIARIVDGSRFNEFKALYGDTLVTGFARIFGYPVGIIGNNGVLFSESAKKGAHFVQLCCQ 393

  Fly   409 RKIPLVFLQNITGFMVGRDAEANGIAKNGAKMVTAVACANVPKFTVIIGGSYGAGNYGMCGRAYS 473
            |.|||:|||||||||||:|.||.||||:|||||.||:||.|||.|||||||||||||||||||||
  Rat   394 RNIPLLFLQNITGFMVGKDYEAEGIAKDGAKMVAAVSCAKVPKITVIIGGSYGAGNYGMCGRAYS 458

  Fly   474 PRFLYMWPNSRISVMGGTQAANVMAQITEDQRKRAGKEFSEEEAQKLKAPIVEMFEAEGSPYYST 538
            |||||||||:|||||||.|||.|:|.:..|||.|.||:||..|...||.||::.||.||:||||:
  Rat   459 PRFLYMWPNARISVMGGEQAATVLATVARDQRAREGKQFSSAEEAALKEPIIKRFEEEGNPYYSS 523

  Fly   539 ARLWDDGIIDPANTRQILGLSLKAALNNAGQETKFGVFRM 578
            |||||||||||.:||.:||||:.||||...|.|.||:|||
  Rat   524 ARLWDDGIIDPVDTRLVLGLSISAALNAPIQRTDFGIFRM 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mccc2NP_652724.1 PLN02820 27..578 CDD:178415 385/551 (70%)
crotonase-like <82..254 CDD:304874 135/171 (79%)
crotonase-like <359..>487 CDD:304874 103/127 (81%)
Mccc2NP_001012177.1 PLN02820 36..563 CDD:178415 374/526 (71%)
Carboxyltransferase. /evidence=ECO:0000255|PROSITE-ProRule:PRU01138 49..555 364/505 (72%)
Acyl-CoA binding. /evidence=ECO:0000255 343..372 24/28 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340971
Domainoid 1 1.000 737 1.000 Domainoid score I96
eggNOG 1 0.900 - - E1_COG4799
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11145
Inparanoid 1 1.050 775 1.000 Inparanoid score I506
OMA 1 1.010 - - QHG62385
OrthoDB 1 1.010 - - D194285at33208
OrthoFinder 1 1.000 - - FOG0004920
OrthoInspector 1 1.000 - - oto96309
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22855
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4587
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.870

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