DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mccc2 and Pccb

DIOPT Version :10

Sequence 1:NP_652724.1 Gene:Mccc2 / 59261 FlyBaseID:FBgn0042083 Length:578 Species:Drosophila melanogaster
Sequence 2:XP_063120991.1 Gene:Pccb / 24624 RGDID:3265 Length:565 Species:Rattus norvegicus


Alignment Length:538 Identity:177/538 - (32%)
Similarity:259/538 - (48%) Gaps:81/538 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SQVRLLHVGDANVLHSEVDKQSA--EYKENAREMASLVGDLRNFTSQVLKGGGQKAIERHTSRGK 79
            :::|:|:.|....:.|...:..:  |..||.|..|             |.||||:.|:....|||
  Rat    14 TRLRVLNCGLRTTIRSLCSQPVSVNERIENKRHAA-------------LLGGGQRRIDAQHKRGK 65

  Fly    80 LLARERINLLLDKGSPFLELSALAGHEL--YG----EEVVNSGGIVTGVGRVCGTECLVVANDAT 138
            |.|||||:||||.|| |:|......|..  :|    :.......:|||.||:.|....|.:.|.|
  Rat    66 LTARERISLLLDPGS-FVESDMFVEHRCADFGMAAEKNKFPGDSVVTGRGRINGRLVYVFSQDFT 129

  Fly   139 VKGGSYYPITVKKHLRAQEIAQENRLPCIYLVDSGGA-------NLPRQADVFPDKLHFGRIFYN 196
            |.|||......:|..:..:.|.....|.|.|.|||||       :|...||:|            
  Rat   130 VFGGSLSGAHAQKICKIMDQAITVGAPVIGLNDSGGARIQEGVESLAGYADIF------------ 182

  Fly   197 QANMSAQG-IPQIAVVMGSCTAGGAYVPAMADESIIVKKQGTIFLAGPPLVKAATGEEVSAEDLG 260
            ..|::|.| ||||:::||.|..|..|.||:.|.:.:||....:|:.||.:||:.|.|:|:.|.||
  Rat   183 LRNVTASGVIPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPEVVKSVTNEDVTQEQLG 247

  Fly   261 GADLHCKTSGVTDHYALD-DEHALYLARQIVSNLNLSATNSYNDQLMHSSQVNFQTATPPSAVEE 324
            ||..|...|||. |.|.| |..||...|:..:.|.||..:                   |:.:.|
  Rat   248 GAKTHTTVSGVA-HRAFDNDVDALCNLREFFNFLPLSNQD-------------------PAPIRE 292

  Fly   325 PRYDAE----ELYGIVGPNLTKSFDVREVIARIVDGSRFTEFKKLYGETLVCGFAKLYGHTVGIV 385
            ....::    ||..:|....:|::::.::|..::|...|.|....|.:.:|.|||::.|.|||||
  Rat   293 CHDPSDRLVPELDTVVPLESSKAYNMLDIIHAVIDEREFFEIMPNYAKNIVIGFARMNGRTVGIV 357

  Fly   386 GN-----NGVLFSESALKGAHFIQLCAQRKIPLVFLQNITGFMVGRDAEANGIAKNGAKMVTAVA 445
            ||     :|.|...|::|||.|::.|....|||:...::.||:.|...|..||.::|||::.|.|
  Rat   358 GNQPNVASGCLDINSSVKGARFVRFCDAFSIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFA 422

  Fly   446 CANVPKFTVIIGGSYGAGNYGMCGRAYSPRFL----YMWPNSRISVMGGTQAANVMAQITEDQRK 506
            .|.|||.|||...:|| |.|.:..   |...|    |.||.:.|:|||...|..::.:..:|. :
  Rat   423 EATVPKITVITRKAYG-GAYDVMS---SKHLLGDTNYAWPTAEIAVMGAKGAVEIIFKGHQDV-E 482

  Fly   507 RAGKEFSEEEAQKLKAPI 524
            .|..|:.|:.|....|.:
  Rat   483 AAQAEYVEKFANPFPAAV 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mccc2NP_652724.1 Carboxyl_trans 27..578 CDD:481543 174/528 (33%)
PccbXP_063120991.1 None

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