DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18530 and LIP1

DIOPT Version :10

Sequence 1:NP_652714.2 Gene:CG18530 / 59241 FlyBaseID:FBgn0042207 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_179126.2 Gene:LIP1 / 816012 AraportID:AT2G15230 Length:393 Species:Arabidopsis thaliana


Alignment Length:392 Identity:121/392 - (30%)
Similarity:195/392 - (49%) Gaps:36/392 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TLVILSVCTQI-------VNGITSAEIIASHNYPVEIHTVVTRDGYLLNAFRIPNSIYCEQSGTK 62
            :|.|.|..||.       ||.: .|::|...||....|::.|:|||:|...|:.:.....|||  
plant    11 SLTIFSALTQSHLLHGSPVNSL-CADLIHPANYSCTEHSIQTKDGYILALQRVASLGPRLQSG-- 72

  Fly    63 PAVLFQHGMTASSDVFLVNGPRDALPFMLADACFDVWLSNSRGTRYSRRHVSLDPSDEDFWRFSW 127
            |.||.|||:..:.||:.:|.|:::|.|:|||..||||:.|.||||||..||:|..:|::||.:||
plant    73 PPVLLQHGLFMAGDVWFLNSPKESLGFILADHGFDVWVGNVRGTRYSYGHVTLSDTDKEFWDWSW 137

  Fly   128 HEIGTEDVAAFIDYILGTTNQSAVHYVGHSQGCTTLVVLLSMRPEYNQFVKTAILLGPPVFMGH- 191
            .::...|:|..|.|:...:| |.:..|||||| |.:......:|...:.|:.|.||.|..::.| 
plant   138 QDLAMYDLAEMIQYLYSISN-SKIFLVGHSQG-TIMSFAALTQPHVAEMVEAAALLCPISYLDHV 200

  Fly   192 THTLGQ----IFLRTLIMSMPDCEFMFHNRILNKILRRIC-GLFVVRVYCSTFFMIVNGKFSDHL 251
            |..|.:    :.|..:::::...:..|.:.:|.|::..:| |    .:.|:.|...:.|. :...
plant   201 TAPLVERMVFMHLDQMVVALGLHQINFRSDMLVKLVDSLCEG----HMDCTDFLTSITGT-NCCF 260

  Fly   252 NTSAIPLIAATLPAGVSSRQPKHFIQLTDSGRFRPFDFGILRNLINYRSLTPPDYPLHNVRPLTP 316
            |.|.|.......|...|.:..:|..|:...|.|..:|:|..:||..|....||::.|.::....|
plant   261 NASKIEYYLDYEPHPSSVKNIRHLFQMIRKGTFAQYDYGYFKNLRTYGLSKPPEFILSHIPASLP 325

  Fly   317 VHIFYSDDDLSAAKEDVENFATSLPEAVMHRISTP------SWHHMDFVHSMTVANVINKPVIEI 375
            :.:.|...|..|...|||:....||       |:|      .:.|:|||...:....:.|.:|:.
plant   326 MWMGYGGTDGLADVTDVEHTLAELP-------SSPELLYLEDYGHIDFVLGSSAKEDVYKHMIQF 383

  Fly   376 FK 377
            |:
plant   384 FR 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18530NP_652714.2 PLN02872 22..377 CDD:215470 113/366 (31%)
LIP1NP_179126.2 PLN02872 6..393 CDD:215470 121/392 (31%)

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