DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18530 and LIPN

DIOPT Version :10

Sequence 1:NP_652714.2 Gene:CG18530 / 59241 FlyBaseID:FBgn0042207 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_001095939.1 Gene:LIPN / 643418 HGNCID:23452 Length:398 Species:Homo sapiens


Alignment Length:369 Identity:118/369 - (31%)
Similarity:181/369 - (49%) Gaps:13/369 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ITSAEIIASHNYPVEIHTVVTRDGYLLNAFRIP-NSIYCEQSGTKPAVLFQHGMTASSDVFLVNG 82
            :.::|||..:.||.|.:.|.|.|||:|...||| ...:...:|.:|.|..||.:.|.:..:|.|.
Human    34 MNTSEIIIYNGYPSEEYEVTTEDGYILLVNRIPYGRTHARSTGPRPVVYMQHALFADNAYWLENY 98

  Fly    83 PRDALPFMLADACFDVWLSNSRGTRYSRRHVSLDPSDEDFWRFSWHEIGTEDVAAFIDYILGTTN 147
            ...:|.|:||||.:|||:.||||..:||||.:|..:||.||.||:.|:...|:...||:|:..|.
Human    99 ANGSLGFLLADAGYDVWMGNSRGNTWSRRHKTLSETDEKFWAFSFDEMAKYDLPGVIDFIVNKTG 163

  Fly   148 QSAVHYVGHSQGCTTLVVLLSMRPEYNQFVKTAILLGPPV-FMGHTHTLGQIFL--RTLIMSMPD 209
            |..::::|||.|.|...|..|..||..|.:|....|||.: |...|....:.||  .::|.::..
Human   164 QEKLYFIGHSLGTTIGFVAFSTMPELAQRIKMNFALGPTISFKYPTGIFTRFFLLPNSIIKAVFG 228

  Fly   210 CEFMFHNRILNKIL-RRICGLFVVRVYCSTFFMIVNGKFSDHLNTSAIPLIAATLPAGVSSRQPK 273
            .:..|......||. .:||...::.:.||.|..:..|....::|.|.:.:..:..|.|.|.....
Human   229 TKGFFLEDKKTKIASTKICNNKILWLICSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNIL 293

  Fly   274 HFIQLTDSGRFRPFDFG-ILRNLINYRSLTPPDYPLHNVRPLTPVHIFYSDDDLSAAKEDVENFA 337
            |..||..|..||.:|:| ...|:.:|....||.|.|..::  .|..|:....|:....:||   |
Human   294 HIKQLYHSDEFRAYDWGNDADNMKHYNQSHPPIYDLTAMK--VPTAIWAGGHDVLVTPQDV---A 353

  Fly   338 TSLPE-AVMHRIS-TPSWHHMDFVHSMTVANVINKPVIEIFKRF 379
            ..||: ..:|... .|.|:|.|||..:.....:...:|.:.|.:
Human   354 RILPQIKSLHYFKLLPDWNHFDFVWGLDAPQRMYSEIIALMKAY 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18530NP_652714.2 PLN02872 22..377 CDD:215470 117/362 (32%)
LIPNNP_001095939.1 PLN02872 37..396 CDD:215470 117/363 (32%)

Return to query results.
Submit another query.