DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18530 and Lip1

DIOPT Version :10

Sequence 1:NP_652714.2 Gene:CG18530 / 59241 FlyBaseID:FBgn0042207 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_523540.1 Gene:Lip1 / 43973 FlyBaseID:FBgn0023496 Length:439 Species:Drosophila melanogaster


Alignment Length:365 Identity:133/365 - (36%)
Similarity:193/365 - (52%) Gaps:33/365 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EIIASHNYPVEIHTVVTRDGYLLNAFRIPNSIYCEQSGTKPAVLFQHGMTASSDVFLVNGPRDAL 87
            ::||.:.|..|:|.|.|.|||:|...||      .:.|. |..|.|||:..||..|:|.||..:|
  Fly    70 KLIAKYGYESEVHHVTTEDGYILTMHRI------RKQGA-PPFLLQHGLVDSSAGFVVMGPNVSL 127

  Fly    88 PFMLADACFDVWLSNSRGTRYSRRHVSLDPSDEDFWRFSWHEIGTEDVAAFIDYILGTTNQSAVH 152
            .::|||..:||||.|:||.||||.|.:|||.:..||.|||||||..|:.|.||::|..|....:|
  Fly   128 AYLLADHNYDVWLGNARGNRYSRNHTTLDPDESKFWDFSWHEIGMYDLPAMIDHVLKVTGFPKLH 192

  Fly   153 YVGHSQGCTTLVVLLSMRPEYNQFVKTAILLGPPVFMGHTHTLGQIFLRTL-----------IMS 206
            |.|||||||:..|:.||||.||..|.:...|.|.|:...|.  ...::|.:           |..
  Fly   193 YAGHSQGCTSFFVMCSMRPAYNDKVVSMQALAPAVYAKETE--DHPYIRAISLYFNSLVGSSIRE 255

  Fly   207 MPDCEFMFHNRILNKILRRICGLFVVRVYCSTFFMIVNGKFSDHLNTSAIPLIAATLPAGVSSRQ 271
            |.:.||.|..|:..: ..|:|        ....|.|| |:..:..|....|:|....||||:::|
  Fly   256 MFNGEFRFLCRMTEE-TERLC--------IEAVFGIV-GRNWNEFNRKMFPVILGHYPAGVAAKQ 310

  Fly   272 PKHFIQLTDSGRFRPFDFGILRNLINYRSLTPPDYPLHNVRPLTPVHIFYSDDDLSAAKEDVENF 336
            .|||||:..||||.|:.:...:|:..||...||.|.|..|  ..|..::||.:||....:|||:.
  Fly   311 VKHFIQIIKSGRFAPYSYSSNKNMQLYRDHLPPRYNLSLV--TVPTFVYYSTNDLLCHPKDVESM 373

  Fly   337 ATSLPEAV-MHRISTPSWHHMDFVHSMTVANVINKPVIEI 375
            ...|.... .:.:....::||||:.::.|..::.:.::::
  Fly   374 CDDLGNVTGKYLVPQKEFNHMDFLWAIDVRKMLYRRMLQV 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18530NP_652714.2 PLN02872 22..377 CDD:215470 133/365 (36%)
Lip1NP_523540.1 PLN02872 70..412 CDD:215470 133/362 (37%)

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