DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18764 and ZNF213

DIOPT Version :9

Sequence 1:NP_652712.2 Gene:CG18764 / 59239 FlyBaseID:FBgn0042205 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001128127.1 Gene:ZNF213 / 7760 HGNCID:13005 Length:459 Species:Homo sapiens


Alignment Length:363 Identity:95/363 - (26%)
Similarity:133/363 - (36%) Gaps:96/363 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 VHRRRSPEAKEPAEDVEEMASPPDCLND-------------------PFGEVDEYIVESPEEVLD 121
            |..||.|..  |.|.....|.||..|.:                   ..|::..|........||
Human   158 VGARRRPSV--PQEQHSHSAQPPALLKEGRPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTLD 220

  Fly   122 HDSDAHHDLDEDNYIDSVEDVDALQDMAEVAEEDS-----------QDVESLISSVQKELESICN 175
               .|..||..|                 :..|:|           |..:||:    :|:..:..
Human   221 ---PAQRDLFWD-----------------IKRENSRNTTLGFGLKGQSEKSLL----QEMVPVVP 261

  Fly   176 DDSNSDNNDYMEPQNGSYFNETINEYEVSSNPNTPLPESKSAAG-----RSTKPATTKPKRKKQY 235
            ..:.||......|:          |.|...:.|.|    ::|.|     |..:|    |.|::|:
Human   262 GQTGSDVTVSWSPE----------EAEAWESENRP----RAALGPVVGARRGRP----PTRRRQF 308

  Fly   236 VTWKNMTEEQIIERKRLQRKRECVCEQCGRQFTDQSNFKLHMLRHTGNKNFACQQCGKRFYTDHL 300
                          :.|..::...|.|||::|...|:...|...|||.|...|.:|.|.|.:...
Human   309 --------------RDLAAEKPHSCGQCGKRFRWGSDLARHQRTHTGEKPHKCPECDKSFRSSSD 359

  Fly   301 MTLHQRIIHQGEKPYDCRFCTKSFHNSNTRLIHERTHTNAKPYSCHHCDKCFKSASGRKRHELIH 365
            :..||. :|.||||:.|..|.|||..|.....|:|.||..||:.|..|.|.|...|....|..:|
Human   360 LVRHQG-VHTGEKPFSCSECGKSFSRSAYLADHQRIHTGEKPFGCSDCGKSFSLRSYLLDHRRVH 423

  Fly   366 TGVRAFACTICKQSFQRNTHLKAHLRSKFHTAKAKTIG 403
            ||.|.|.|..|.:||::..||.||  ...|...|:.:|
Human   424 TGERPFGCGECDKSFKQRAHLIAH--QSLHAKMAQPVG 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18764NP_652712.2 zf-AD 4..75 CDD:214871
C2H2 Zn finger 260..280 CDD:275368 7/19 (37%)
zf-H2C2_2 272..297 CDD:290200 9/24 (38%)
C2H2 Zn finger 288..309 CDD:275368 6/20 (30%)
C2H2 Zn finger 317..337 CDD:275368 8/19 (42%)
C2H2 Zn finger 345..365 CDD:275368 6/19 (32%)
C2H2 Zn finger 373..391 CDD:275368 8/17 (47%)
ZNF213NP_001128127.1 SCAN 41..145 CDD:128708
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..188 10/31 (32%)
KRAB_A-box 202..237 CDD:143639 10/54 (19%)
COG5048 <315..451 CDD:227381 53/138 (38%)
C2H2 Zn finger 319..339 CDD:275368 7/19 (37%)
C2H2 Zn finger 347..367 CDD:275368 6/20 (30%)
C2H2 Zn finger 375..395 CDD:275368 8/19 (42%)
C2H2 Zn finger 403..423 CDD:275368 6/19 (32%)
C2H2 Zn finger 431..451 CDD:275368 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4733
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.