DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18764 and CG4424

DIOPT Version :9

Sequence 1:NP_652712.2 Gene:CG18764 / 59239 FlyBaseID:FBgn0042205 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:425 Identity:100/425 - (23%)
Similarity:154/425 - (36%) Gaps:138/425 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALQCRTC-----GSIIYNKMPKNLFHIENEKMLQDINL------VTGTTLH---NDPELPSSIC 51
            |...||||     ..::      ::|...::::...::|      ::|..:.   .:..||:.||
  Fly     7 MMTLCRTCLQDGEAHMV------SIFQTADDRLPGGVSLCDKIESLSGIQIRATAKEEVLPTRIC 65

  Fly    52 ACCTLDLNQAILFRERCILTQKQLVHRRRSPE---------------AKEPAEDVEEMASPPDCL 101
            ..|...|..|..||:.|          :||.|               .||..:.......||   
  Fly    66 LRCKAFLTLAHKFRQIC----------QRSNEFLREYVIKDAVEQGVVKEVVQQTRPSTPPP--- 117

  Fly   102 NDPFGEVDEYIVESPE-EVLDHDSDAHHDLDEDNYIDSVEDVDALQDMAEVAEEDSQDVESLISS 165
                  ::...:|.|| |||:                  |.|.:.:|..|         |:....
  Fly   118 ------IETEQLEPPEDEVLE------------------EGVWSTEDPIE---------ETPHGP 149

  Fly   166 VQKELESICNDDSNSDNNDYMEPQNGSYFNETINEYEVSSNPNTPLPESKSAAGRSTKPATTKPK 230
            .:||                         ..|:...|:...|..|             ||:|.|.
  Fly   150 AEKE-------------------------RPTVLTVEMLPAPYPP-------------PASTPPP 176

  Fly   231 RKKQYVTWKNMTEEQIIERKRLQRKRECVCEQCGRQFTDQSNFKLHMLRHTGNKNFACQQCGKRF 295
            .....|..|..                 ||..||..:..:|....||.||...:.:.|:.|.|.|
  Fly   177 APAGAVKGKLH-----------------VCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSF 224

  Fly   296 YTDHLMTLHQRIIHQGEKPYDCRFCTKSFHNSNTRLIHERTHTNAKPYSCHHCDKCFKSASGRKR 360
            :.::.:..|.| .|.|.|||.|::|.::|.:..:.:.|||||.|.:||:|..|.|.|..||..|.
  Fly   225 HVNYQLKRHIR-QHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKM 288

  Fly   361 HELIHTGVRAFACTICKQSFQRNTHLKAHLRSKFH 395
            |...|||.:...|.:|.:||.|..:|.|||:::.|
  Fly   289 HYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQH 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18764NP_652712.2 zf-AD 4..75 CDD:214871 17/84 (20%)
C2H2 Zn finger 260..280 CDD:275368 6/19 (32%)
zf-H2C2_2 272..297 CDD:290200 8/24 (33%)
C2H2 Zn finger 288..309 CDD:275368 6/20 (30%)
C2H2 Zn finger 317..337 CDD:275368 6/19 (32%)
C2H2 Zn finger 345..365 CDD:275368 8/19 (42%)
C2H2 Zn finger 373..391 CDD:275368 8/17 (47%)
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 20/97 (21%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
DUF45 <204..281 CDD:302795 29/77 (38%)
COG5048 210..>345 CDD:227381 43/115 (37%)
C2H2 Zn finger 217..237 CDD:275368 6/20 (30%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 9/23 (39%)
C2H2 Zn finger 301..320 CDD:275368 9/18 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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